Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.71
KCNQ4P56696 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.01■■■□□ 2.71
KCNQ4P56696 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.71
KCNQ4P56696 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
KCNQ4P56696 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
KCNQ4P56696 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
KCNQ4P56696 RNF146-205ENST00000477776 762 ntTSL 3 BASIC32■■■□□ 2.71
KCNQ4P56696 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
KCNQ4P56696 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
KCNQ4P56696 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
KCNQ4P56696 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
KCNQ4P56696 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.97■■■□□ 2.71
KCNQ4P56696 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
KCNQ4P56696 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
KCNQ4P56696 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
KCNQ4P56696 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
KCNQ4P56696 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
KCNQ4P56696 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.95■■■□□ 2.71
KCNQ4P56696 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.94■■■□□ 2.7
KCNQ4P56696 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
KCNQ4P56696 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
KCNQ4P56696 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNQ4P56696 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
KCNQ4P56696 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.92■■■□□ 2.7
KCNQ4P56696 AL359504.2-201ENST00000605506 1601 ntBASIC31.92■■■□□ 2.7
KCNQ4P56696 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
KCNQ4P56696 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
KCNQ4P56696 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
KCNQ4P56696 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.9■■■□□ 2.7
KCNQ4P56696 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.9■■■□□ 2.7
KCNQ4P56696 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
KCNQ4P56696 AC008406.3-201ENST00000620001 1374 ntBASIC31.9■■■□□ 2.7
KCNQ4P56696 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
KCNQ4P56696 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.89■■■□□ 2.7
KCNQ4P56696 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
KCNQ4P56696 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
KCNQ4P56696 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.89■■■□□ 2.7
KCNQ4P56696 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.88■■■□□ 2.69
KCNQ4P56696 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.88■■■□□ 2.69
KCNQ4P56696 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
KCNQ4P56696 ABCB10P3-201ENST00000561950 2166 ntBASIC31.88■■■□□ 2.69
KCNQ4P56696 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.87■■■□□ 2.69
KCNQ4P56696 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
KCNQ4P56696 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.87■■■□□ 2.69
KCNQ4P56696 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
KCNQ4P56696 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
KCNQ4P56696 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
KCNQ4P56696 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
KCNQ4P56696 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.85■■■□□ 2.69
KCNQ4P56696 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
KCNQ4P56696 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.84■■■□□ 2.69
KCNQ4P56696 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KCNQ4P56696 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.83■■■□□ 2.69
KCNQ4P56696 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KCNQ4P56696 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.83■■■□□ 2.69
KCNQ4P56696 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.83■■■□□ 2.69
KCNQ4P56696 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.82■■■□□ 2.68
KCNQ4P56696 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
KCNQ4P56696 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.82■■■□□ 2.68
KCNQ4P56696 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
KCNQ4P56696 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
KCNQ4P56696 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.81■■■□□ 2.68
KCNQ4P56696 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
KCNQ4P56696 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNQ4P56696 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNQ4P56696 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
KCNQ4P56696 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.8■■■□□ 2.68
KCNQ4P56696 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
KCNQ4P56696 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
KCNQ4P56696 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.79■■■□□ 2.68
KCNQ4P56696 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.79■■■□□ 2.68
KCNQ4P56696 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNQ4P56696 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.78■■■□□ 2.68
KCNQ4P56696 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.78■■■□□ 2.68
KCNQ4P56696 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.78■■■□□ 2.68
KCNQ4P56696 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNQ4P56696 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.78■■■□□ 2.68
KCNQ4P56696 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
KCNQ4P56696 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ4P56696 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ4P56696 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KCNQ4P56696 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
KCNQ4P56696 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ4P56696 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ4P56696 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
KCNQ4P56696 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
KCNQ4P56696 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
KCNQ4P56696 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
KCNQ4P56696 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
KCNQ4P56696 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
KCNQ4P56696 AC087393.1-201ENST00000582896 145 ntBASIC31.75■■■□□ 2.67
KCNQ4P56696 AC019171.1-201ENST00000601251 1056 ntBASIC31.75■■■□□ 2.67
KCNQ4P56696 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.74■■■□□ 2.67
KCNQ4P56696 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNQ4P56696 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
KCNQ4P56696 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.74■■■□□ 2.67
KCNQ4P56696 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
KCNQ4P56696 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
KCNQ4P56696 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
KCNQ4P56696 AL139393.2-201ENST00000608721 2025 ntBASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms