Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
CLTCL1P53675 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC35.83■■■■□ 3.33
CLTCL1P53675 PVT1_1.1-201ENST00000615125 194 ntBASIC35.83■■■■□ 3.33
CLTCL1P53675 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC35.82■■■■□ 3.33
CLTCL1P53675 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC35.82■■■■□ 3.33
CLTCL1P53675 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
CLTCL1P53675 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
CLTCL1P53675 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC35.81■■■■□ 3.32
CLTCL1P53675 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC35.8■■■■□ 3.32
CLTCL1P53675 AC010980.1-201ENST00000587192 1142 ntBASIC35.8■■■■□ 3.32
CLTCL1P53675 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC35.79■■■■□ 3.32
CLTCL1P53675 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC35.79■■■■□ 3.32
CLTCL1P53675 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.78■■■■□ 3.32
CLTCL1P53675 DRD5P2-201ENST00000421395 2012 ntBASIC35.78■■■■□ 3.32
CLTCL1P53675 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CLTCL1P53675 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC35.78■■■■□ 3.32
CLTCL1P53675 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CLTCL1P53675 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CLTCL1P53675 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CLTCL1P53675 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC35.78■■■■□ 3.32
CLTCL1P53675 AL035685.1-201ENST00000636663 812 ntBASIC35.78■■■■□ 3.32
CLTCL1P53675 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC35.77■■■■□ 3.32
CLTCL1P53675 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC35.77■■■■□ 3.32
CLTCL1P53675 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CLTCL1P53675 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC35.77■■■■□ 3.32
CLTCL1P53675 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.77■■■■□ 3.32
CLTCL1P53675 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.76■■■■□ 3.32
CLTCL1P53675 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CLTCL1P53675 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC35.76■■■■□ 3.32
CLTCL1P53675 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CLTCL1P53675 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.75■■■■□ 3.31
CLTCL1P53675 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.75■■■■□ 3.31
CLTCL1P53675 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CLTCL1P53675 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC35.75■■■■□ 3.31
CLTCL1P53675 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC35.74■■■■□ 3.31
CLTCL1P53675 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CLTCL1P53675 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CLTCL1P53675 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CLTCL1P53675 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
CLTCL1P53675 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CLTCL1P53675 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC35.73■■■■□ 3.31
CLTCL1P53675 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC35.73■■■■□ 3.31
CLTCL1P53675 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC35.73■■■■□ 3.31
CLTCL1P53675 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC35.72■■■■□ 3.31
CLTCL1P53675 KRT8P33-201ENST00000508125 1423 ntBASIC35.72■■■■□ 3.31
CLTCL1P53675 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC35.72■■■■□ 3.31
CLTCL1P53675 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC35.72■■■■□ 3.31
CLTCL1P53675 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35.72■■■■□ 3.31
CLTCL1P53675 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC35.71■■■■□ 3.31
CLTCL1P53675 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
CLTCL1P53675 IDNK-203ENST00000405990 629 ntTSL 2 BASIC35.7■■■■□ 3.31
CLTCL1P53675 TRIR-205ENST00000592273 783 ntTSL 3 BASIC35.7■■■■□ 3.31
CLTCL1P53675 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
CLTCL1P53675 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CLTCL1P53675 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC35.69■■■■□ 3.3
CLTCL1P53675 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
CLTCL1P53675 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC35.68■■■■□ 3.3
CLTCL1P53675 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC35.68■■■■□ 3.3
CLTCL1P53675 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC35.68■■■■□ 3.3
CLTCL1P53675 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CLTCL1P53675 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
CLTCL1P53675 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CLTCL1P53675 AC139795.1-202ENST00000500444 432 ntBASIC35.68■■■■□ 3.3
CLTCL1P53675 AC103834.1-201ENST00000520383 144 ntBASIC35.68■■■■□ 3.3
CLTCL1P53675 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.67■■■■□ 3.3
CLTCL1P53675 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CLTCL1P53675 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CLTCL1P53675 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CLTCL1P53675 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC35.66■■■■□ 3.3
CLTCL1P53675 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC35.66■■■■□ 3.3
CLTCL1P53675 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC35.66■■■■□ 3.3
CLTCL1P53675 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CLTCL1P53675 AC009299.2-201ENST00000482477 511 ntBASIC35.65■■■■□ 3.3
CLTCL1P53675 MIR4508-201ENST00000584178 70 ntBASIC35.65■■■■□ 3.3
CLTCL1P53675 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.65■■■■□ 3.3
CLTCL1P53675 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC35.64■■■■□ 3.3
CLTCL1P53675 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC35.64■■■■□ 3.3
CLTCL1P53675 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CLTCL1P53675 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC35.63■■■■□ 3.29
CLTCL1P53675 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CLTCL1P53675 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
CLTCL1P53675 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CLTCL1P53675 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC35.61■■■■□ 3.29
CLTCL1P53675 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
CLTCL1P53675 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CLTCL1P53675 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC35.6■■■■□ 3.29
CLTCL1P53675 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CLTCL1P53675 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC35.6■■■■□ 3.29
CLTCL1P53675 AC074183.2-201ENST00000623112 922 ntBASIC35.59■■■■□ 3.29
CLTCL1P53675 AL449106.1-201ENST00000608517 1980 ntBASIC35.59■■■■□ 3.29
CLTCL1P53675 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CLTCL1P53675 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CLTCL1P53675 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CLTCL1P53675 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.58■■■■□ 3.29
CLTCL1P53675 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CLTCL1P53675 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC35.57■■■■□ 3.29
CLTCL1P53675 HYI-210ENST00000486909 905 ntTSL 5 BASIC35.57■■■■□ 3.28
CLTCL1P53675 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.57■■■■□ 3.28
CLTCL1P53675 AC103724.3-201ENST00000564481 992 ntBASIC35.57■■■■□ 3.28
CLTCL1P53675 BHLHE23-202ENST00000612929 1109 ntBASIC35.57■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms