Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 GCD11YER025W 1584 nt7.67□□□□□ -1.18
RPT4P53549 SRL2YLR082C 1179 nt7.66□□□□□ -1.18
RPT4P53549 NUP84YDL116W 2181 nt7.65□□□□□ -1.18
RPT4P53549 CEM1YER061C 1329 nt7.65□□□□□ -1.18
RPT4P53549 ERG1YGR175C 1491 nt7.65□□□□□ -1.18
RPT4P53549 GPA2YER020W 1350 nt7.64□□□□□ -1.19
RPT4P53549 MET8YBR213W 825 nt7.64□□□□□ -1.19
RPT4P53549 YKR018CYKR018C 2178 nt7.64□□□□□ -1.19
RPT4P53549 PAC2YER007W 1557 nt7.63□□□□□ -1.19
RPT4P53549 ARE2YNR019W 1929 nt7.63□□□□□ -1.19
RPT4P53549 PSR2YLR019W 1194 nt7.63□□□□□ -1.19
RPT4P53549 SEN34YAR008W 828 nt7.63□□□□□ -1.19
RPT4P53549 PTC4YBR125C 1182 nt7.63□□□□□ -1.19
RPT4P53549 MDL2YPL270W 2322 nt7.63□□□□□ -1.19
RPT4P53549 SEC24YIL109C 2781 nt7.62□□□□□ -1.19
RPT4P53549 STT3YGL022W 2157 nt7.62□□□□□ -1.19
RPT4P53549 FAL1YDR021W 1200 nt7.62□□□□□ -1.19
RPT4P53549 SDH4YDR178W 546 nt7.62□□□□□ -1.19
RPT4P53549 LYS1YIR034C 1122 nt7.62□□□□□ -1.19
RPT4P53549 RFC4YOL094C 972 nt7.62□□□□□ -1.19
RPT4P53549 RVB2YPL235W 1416 nt7.61□□□□□ -1.19
RPT4P53549 GLC8YMR311C 690 nt7.61□□□□□ -1.19
RPT4P53549 YPL102CYPL102C 303 nt7.61□□□□□ -1.19
RPT4P53549 NAS6YGR232W 687 nt7.6□□□□□ -1.19
RPT4P53549 GTO3YMR251W 1101 nt7.6□□□□□ -1.19
RPT4P53549 SNU66YOR308C 1764 nt7.6□□□□□ -1.19
RPT4P53549 TIF2YJL138C 1188 nt7.59□□□□□ -1.19
RPT4P53549 TIF1YKR059W 1188 nt7.59□□□□□ -1.19
RPT4P53549 SNN1YNL086W 309 nt7.59□□□□□ -1.19
RPT4P53549 TSR3YOR006C 942 nt7.59□□□□□ -1.19
RPT4P53549 YPL257WYPL257W 582 nt7.59□□□□□ -1.19
RPT4P53549 YGR054WYGR054W 1929 nt7.58□□□□□ -1.2
RPT4P53549 TIM22YDL217C 624 nt7.58□□□□□ -1.2
RPT4P53549 MRPL28YDR462W 444 nt7.58□□□□□ -1.2
RPT4P53549 YHR213W-AYHR213W-A 234 nt7.58□□□□□ -1.2
RPT4P53549 DOT5YIL010W 648 nt7.58□□□□□ -1.2
RPT4P53549 IRC11YOR013W 471 nt7.58□□□□□ -1.2
RPT4P53549 ATG36YJL185C 882 nt7.57□□□□□ -1.2
RPT4P53549 YJR146WYJR146W 354 nt7.57□□□□□ -1.2
RPT4P53549 SNT309YPR101W 528 nt7.57□□□□□ -1.2
RPT4P53549 AMN1YBR158W 1650 nt7.57□□□□□ -1.2
RPT4P53549 YLL066CYLL066C 3618 nt7.57□□□□□ -1.2
RPT4P53549 YLL067CYLL067C 3618 nt7.57□□□□□ -1.2
RPT4P53549 DFR1YOR236W 636 nt7.56□□□□□ -1.2
RPT4P53549 SIT4YDL047W 936 nt7.55□□□□□ -1.2
RPT4P53549 RUF23RUF23 254 nt7.55□□□□□ -1.2
RPT4P53549 PRB1YEL060C 1908 nt7.54□□□□□ -1.2
RPT4P53549 YCR041WYCR041W 333 nt7.54□□□□□ -1.2
RPT4P53549 YLR112WYLR112W 420 nt7.54□□□□□ -1.2
RPT4P53549 PRC1YMR297W 1599 nt7.54□□□□□ -1.2
RPT4P53549 LPD1YFL018C 1500 nt7.53□□□□□ -1.2
RPT4P53549 ECM10YEL030W 1935 nt7.53□□□□□ -1.2
RPT4P53549 RAD59YDL059C 717 nt7.53□□□□□ -1.2
RPT4P53549 ECM19YLR390W 339 nt7.53□□□□□ -1.2
RPT4P53549 MIP1YOR330C 3765 nt7.53□□□□□ -1.2
RPT4P53549 YDL218WYDL218W 954 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)BtG(GCC)B 71 nt7.52□□□□□ -1.21
RPT4P53549 SUF16tG(GCC)C 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)D1tG(GCC)D1 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)D2tG(GCC)D2 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)EtG(GCC)E 71 nt7.52□□□□□ -1.21
RPT4P53549 SUF20tG(GCC)F1 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)F2tG(GCC)F2 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)G1tG(GCC)G1 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)G2tG(GCC)G2 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)J1tG(GCC)J1 71 nt7.52□□□□□ -1.21
RPT4P53549 SUF23tG(GCC)J2 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)MtG(GCC)M 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)O1tG(GCC)O1 71 nt7.52□□□□□ -1.21
RPT4P53549 SUF17tG(GCC)O2 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)P1tG(GCC)P1 71 nt7.52□□□□□ -1.21
RPT4P53549 tG(GCC)P2tG(GCC)P2 71 nt7.52□□□□□ -1.21
RPT4P53549 AAT2YLR027C 1257 nt7.52□□□□□ -1.21
RPT4P53549 OGG1YML060W 1131 nt7.52□□□□□ -1.21
RPT4P53549 RGD2YFL047W 2145 nt7.51□□□□□ -1.21
RPT4P53549 YFL013W-AYFL013W-A 804 nt7.51□□□□□ -1.21
RPT4P53549 SNF4YGL115W 969 nt7.51□□□□□ -1.21
RPT4P53549 UFD1YGR048W 1086 nt7.51□□□□□ -1.21
RPT4P53549 BUD32YGR262C 786 nt7.51□□□□□ -1.21
RPT4P53549 YNL285WYNL285W 372 nt7.51□□□□□ -1.21
RPT4P53549 OPI11YPR044C 354 nt7.51□□□□□ -1.21
RPT4P53549 TOD6YBL054W 1578 nt7.5□□□□□ -1.21
RPT4P53549 HEM2YGL040C 1029 nt7.5□□□□□ -1.21
RPT4P53549 MDE1YJR024C 735 nt7.5□□□□□ -1.21
RPT4P53549 YJR084WYJR084W 1272 nt7.5□□□□□ -1.21
RPT4P53549 CRF1YDR223W 1404 nt7.5□□□□□ -1.21
RPT4P53549 MLS1YNL117W 1665 nt7.5□□□□□ -1.21
RPT4P53549 SLA2YNL243W 2907 nt7.49□□□□□ -1.21
RPT4P53549 SYF2YGR129W 648 nt7.49□□□□□ -1.21
RPT4P53549 EGD2YHR193C 525 nt7.49□□□□□ -1.21
RPT4P53549 SPE4YLR146C 903 nt7.49□□□□□ -1.21
RPT4P53549 ENV7YPL236C 1095 nt7.49□□□□□ -1.21
RPT4P53549 YDR015CYDR015C 240 nt7.48□□□□□ -1.21
RPT4P53549 MIA40YKL195W 1212 nt7.48□□□□□ -1.21
RPT4P53549 SUR7YML052W 909 nt7.48□□□□□ -1.21
RPT4P53549 PPT1YGR123C 1542 nt7.47□□□□□ -1.21
RPT4P53549 YDL172CYDL172C 480 nt7.47□□□□□ -1.21
RPT4P53549 RDN5-2RDN5-2 119 nt7.47□□□□□ -1.21
RPT4P53549 RDN5-3RDN5-3 119 nt7.47□□□□□ -1.21
RPT4P53549 RDN5-4RDN5-4 119 nt7.47□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms