Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 RP9P-202ENST00000450133 1212 ntBASIC24.12■■□□□ 1.45
CLCNKAP51800 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CLCNKAP51800 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLCNKAP51800 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLCNKAP51800 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCNKAP51800 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCNKAP51800 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CLCNKAP51800 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.1■■□□□ 1.45
CLCNKAP51800 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLCNKAP51800 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.1■■□□□ 1.45
CLCNKAP51800 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.09■■□□□ 1.45
CLCNKAP51800 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLCNKAP51800 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.09■■□□□ 1.45
CLCNKAP51800 AC026202.3-201ENST00000600805 1127 ntBASIC24.08■■□□□ 1.45
CLCNKAP51800 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CLCNKAP51800 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCNKAP51800 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCNKAP51800 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CLCNKAP51800 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCNKAP51800 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CLCNKAP51800 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCNKAP51800 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.07■■□□□ 1.44
CLCNKAP51800 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.06■■□□□ 1.44
CLCNKAP51800 AC009831.1-201ENST00000580420 1582 ntBASIC24.06■■□□□ 1.44
CLCNKAP51800 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.06■■□□□ 1.44
CLCNKAP51800 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCNKAP51800 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CLCNKAP51800 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCNKAP51800 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.05■■□□□ 1.44
CLCNKAP51800 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CLCNKAP51800 AC093536.1-201ENST00000569153 554 ntBASIC24.05■■□□□ 1.44
CLCNKAP51800 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCNKAP51800 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCNKAP51800 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CLCNKAP51800 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCNKAP51800 RAP2CP1-202ENST00000605179 643 ntBASIC24.04■■□□□ 1.44
CLCNKAP51800 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CLCNKAP51800 AC133552.2-201ENST00000619106 1032 ntBASIC24.04■■□□□ 1.44
CLCNKAP51800 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CLCNKAP51800 KRT18P60-201ENST00000312876 1297 ntBASIC24.03■■□□□ 1.44
CLCNKAP51800 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.03■■□□□ 1.44
CLCNKAP51800 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCNKAP51800 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCNKAP51800 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCNKAP51800 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCNKAP51800 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCNKAP51800 AC012354.3-201ENST00000623734 483 ntBASIC24.02■■□□□ 1.44
CLCNKAP51800 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCNKAP51800 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLCNKAP51800 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.01■■□□□ 1.43
CLCNKAP51800 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCNKAP51800 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLCNKAP51800 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CLCNKAP51800 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CLCNKAP51800 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CLCNKAP51800 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24■■□□□ 1.43
CLCNKAP51800 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CLCNKAP51800 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CLCNKAP51800 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CLCNKAP51800 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCNKAP51800 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCNKAP51800 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCNKAP51800 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCNKAP51800 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCNKAP51800 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.98■■□□□ 1.43
CLCNKAP51800 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCNKAP51800 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CLCNKAP51800 AL592293.1-201ENST00000502889 1188 ntBASIC23.98■■□□□ 1.43
CLCNKAP51800 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CLCNKAP51800 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.98■■□□□ 1.43
CLCNKAP51800 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCNKAP51800 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CLCNKAP51800 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CLCNKAP51800 AP004609.3-201ENST00000610705 1884 ntBASIC23.98■■□□□ 1.43
CLCNKAP51800 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCNKAP51800 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCNKAP51800 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCNKAP51800 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.97■■□□□ 1.43
CLCNKAP51800 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCNKAP51800 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLCNKAP51800 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CLCNKAP51800 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.96■■□□□ 1.43
CLCNKAP51800 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCNKAP51800 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.96■■□□□ 1.43
CLCNKAP51800 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCNKAP51800 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCNKAP51800 AC142472.1-201ENST00000612013 1741 ntBASIC23.96■■□□□ 1.43
CLCNKAP51800 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCNKAP51800 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLCNKAP51800 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms