Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC6A12P48065 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC6A12P48065 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC6A12P48065 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC6A12P48065 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC6A12P48065 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
SLC6A12P48065 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 AC126177.7-201ENST00000547904 679 ntBASIC23.8■■□□□ 1.4
SLC6A12P48065 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.8■■□□□ 1.4
SLC6A12P48065 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC6A12P48065 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC6A12P48065 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SLC6A12P48065 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC6A12P48065 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC6A12P48065 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A12P48065 AL359504.2-201ENST00000605506 1601 ntBASIC23.77■■□□□ 1.4
SLC6A12P48065 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC6A12P48065 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A12P48065 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A12P48065 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC6A12P48065 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
SLC6A12P48065 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC6A12P48065 AC092803.2-201ENST00000564287 1899 ntBASIC23.77■■□□□ 1.4
SLC6A12P48065 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A12P48065 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A12P48065 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A12P48065 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC6A12P48065 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A12P48065 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A12P48065 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SLC6A12P48065 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
SLC6A12P48065 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A12P48065 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC6A12P48065 AC145676.1-201ENST00000514988 2004 ntBASIC23.75■■□□□ 1.39
SLC6A12P48065 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A12P48065 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC6A12P48065 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SLC6A12P48065 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC6A12P48065 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SLC6A12P48065 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A12P48065 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.73■■□□□ 1.39
SLC6A12P48065 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A12P48065 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A12P48065 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC6A12P48065 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC6A12P48065 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A12P48065 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A12P48065 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.72■■□□□ 1.39
SLC6A12P48065 DUSP8P4-201ENST00000399538 1761 ntBASIC23.72■■□□□ 1.39
SLC6A12P48065 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC6A12P48065 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC6A12P48065 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC6A12P48065 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.71■■□□□ 1.39
SLC6A12P48065 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SLC6A12P48065 AC060814.1-201ENST00000554326 538 ntBASIC23.7■■□□□ 1.38
SLC6A12P48065 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SLC6A12P48065 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SLC6A12P48065 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.69■■□□□ 1.38
SLC6A12P48065 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.69■■□□□ 1.38
SLC6A12P48065 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
SLC6A12P48065 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
SLC6A12P48065 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 AL157400.5-201ENST00000507624 621 ntBASIC23.68■■□□□ 1.38
SLC6A12P48065 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.68■■□□□ 1.38
SLC6A12P48065 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SLC6A12P48065 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.68■■□□□ 1.38
SLC6A12P48065 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SLC6A12P48065 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SLC6A12P48065 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A12P48065 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A12P48065 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SLC6A12P48065 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC6A12P48065 MIR4449-201ENST00000578365 66 ntBASIC23.66■■□□□ 1.38
SLC6A12P48065 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.66■■□□□ 1.38
SLC6A12P48065 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SLC6A12P48065 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SLC6A12P48065 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.65■■□□□ 1.38
SLC6A12P48065 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms