Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDNFP39905 AP004609.3-201ENST00000610705 1884 ntBASIC21.2■□□□□ 0.98
GDNFP39905 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.2■□□□□ 0.98
GDNFP39905 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDNFP39905 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.19■□□□□ 0.98
GDNFP39905 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDNFP39905 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GDNFP39905 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDNFP39905 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GDNFP39905 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.18■□□□□ 0.98
GDNFP39905 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.18■□□□□ 0.98
GDNFP39905 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDNFP39905 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDNFP39905 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDNFP39905 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDNFP39905 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.17■□□□□ 0.98
GDNFP39905 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
GDNFP39905 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDNFP39905 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDNFP39905 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDNFP39905 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDNFP39905 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDNFP39905 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.16■□□□□ 0.98
GDNFP39905 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDNFP39905 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDNFP39905 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDNFP39905 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDNFP39905 AC135983.2-203ENST00000454486 1613 ntBASIC21.14■□□□□ 0.97
GDNFP39905 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
GDNFP39905 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
GDNFP39905 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.13■□□□□ 0.97
GDNFP39905 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDNFP39905 WHAMMP2-203ENST00000563942 1603 ntBASIC21.13■□□□□ 0.97
GDNFP39905 LINC00273-201ENST00000539813 1452 ntBASIC21.13■□□□□ 0.97
GDNFP39905 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GDNFP39905 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.12■□□□□ 0.97
GDNFP39905 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 AC021231.2-201ENST00000594613 730 ntBASIC21.12■□□□□ 0.97
GDNFP39905 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDNFP39905 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDNFP39905 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDNFP39905 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDNFP39905 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GDNFP39905 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
GDNFP39905 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDNFP39905 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GDNFP39905 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.11■□□□□ 0.97
GDNFP39905 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDNFP39905 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDNFP39905 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDNFP39905 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDNFP39905 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDNFP39905 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
GDNFP39905 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDNFP39905 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDNFP39905 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDNFP39905 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.08■□□□□ 0.97
GDNFP39905 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.08■□□□□ 0.97
GDNFP39905 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.08■□□□□ 0.96
GDNFP39905 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
GDNFP39905 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
GDNFP39905 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.07■□□□□ 0.96
GDNFP39905 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDNFP39905 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GDNFP39905 DUX4L29-201ENST00000425409 679 ntBASIC21.07■□□□□ 0.96
GDNFP39905 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
GDNFP39905 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GDNFP39905 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDNFP39905 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDNFP39905 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDNFP39905 AC142381.3-201ENST00000568208 1670 ntBASIC21.06■□□□□ 0.96
GDNFP39905 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GDNFP39905 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
GDNFP39905 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.06■□□□□ 0.96
GDNFP39905 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GDNFP39905 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GDNFP39905 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.05■□□□□ 0.96
GDNFP39905 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.05■□□□□ 0.96
GDNFP39905 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GDNFP39905 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
GDNFP39905 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GDNFP39905 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms