Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.82■■□□□ 1.08
SOX6P35712 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX6P35712 SETD8P1-201ENST00000623146 1180 ntBASIC21.82■■□□□ 1.08
SOX6P35712 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SOX6P35712 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SOX6P35712 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.82■■□□□ 1.08
SOX6P35712 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX6P35712 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SOX6P35712 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SOX6P35712 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SOX6P35712 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX6P35712 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SOX6P35712 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.8■■□□□ 1.08
SOX6P35712 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SOX6P35712 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX6P35712 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SOX6P35712 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SOX6P35712 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX6P35712 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX6P35712 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX6P35712 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SOX6P35712 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX6P35712 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SOX6P35712 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.79■■□□□ 1.08
SOX6P35712 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.79■■□□□ 1.08
SOX6P35712 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX6P35712 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.78■■□□□ 1.08
SOX6P35712 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX6P35712 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX6P35712 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX6P35712 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX6P35712 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SOX6P35712 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX6P35712 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX6P35712 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX6P35712 AL133380.1-201ENST00000506013 324 ntBASIC21.77■■□□□ 1.08
SOX6P35712 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SOX6P35712 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
SOX6P35712 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SOX6P35712 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX6P35712 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX6P35712 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX6P35712 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX6P35712 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX6P35712 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX6P35712 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX6P35712 AL139125.2-201ENST00000623134 1869 ntBASIC21.75■■□□□ 1.07
SOX6P35712 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX6P35712 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX6P35712 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX6P35712 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX6P35712 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX6P35712 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX6P35712 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX6P35712 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SOX6P35712 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX6P35712 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX6P35712 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SOX6P35712 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SOX6P35712 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.73■■□□□ 1.07
SOX6P35712 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX6P35712 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX6P35712 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX6P35712 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX6P35712 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX6P35712 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SOX6P35712 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SOX6P35712 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX6P35712 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX6P35712 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX6P35712 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SOX6P35712 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SOX6P35712 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SOX6P35712 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SOX6P35712 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.69■■□□□ 1.06
SOX6P35712 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.69■■□□□ 1.06
SOX6P35712 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SOX6P35712 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms