Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CIITAP33076 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.86■■■□□ 2.05
CIITAP33076 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
CIITAP33076 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CIITAP33076 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CIITAP33076 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.85■■■□□ 2.05
CIITAP33076 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CIITAP33076 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CIITAP33076 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.84■■■□□ 2.05
CIITAP33076 MIR3960-201ENST00000583311 91 ntBASIC27.84■■■□□ 2.05
CIITAP33076 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.84■■■□□ 2.05
CIITAP33076 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CIITAP33076 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CIITAP33076 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CIITAP33076 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.83■■■□□ 2.05
CIITAP33076 RP9P-202ENST00000450133 1212 ntBASIC27.83■■■□□ 2.05
CIITAP33076 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.83■■■□□ 2.05
CIITAP33076 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.82■■■□□ 2.04
CIITAP33076 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.82■■■□□ 2.04
CIITAP33076 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CIITAP33076 AP004609.3-201ENST00000610705 1884 ntBASIC27.82■■■□□ 2.04
CIITAP33076 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CIITAP33076 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CIITAP33076 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.82■■■□□ 2.04
CIITAP33076 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CIITAP33076 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CIITAP33076 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CIITAP33076 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
CIITAP33076 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CIITAP33076 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
CIITAP33076 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.8■■■□□ 2.04
CIITAP33076 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CIITAP33076 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
CIITAP33076 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CIITAP33076 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CIITAP33076 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.79■■■□□ 2.04
CIITAP33076 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CIITAP33076 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CIITAP33076 U85056.1-201ENST00000616429 682 ntBASIC27.79■■■□□ 2.04
CIITAP33076 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.78■■■□□ 2.04
CIITAP33076 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.78■■■□□ 2.04
CIITAP33076 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CIITAP33076 AC026202.3-201ENST00000600805 1127 ntBASIC27.78■■■□□ 2.04
CIITAP33076 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CIITAP33076 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CIITAP33076 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CIITAP33076 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
CIITAP33076 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
CIITAP33076 AC093536.1-201ENST00000569153 554 ntBASIC27.77■■■□□ 2.04
CIITAP33076 NTF6A-201ENST00000591175 560 ntBASIC27.77■■■□□ 2.04
CIITAP33076 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CIITAP33076 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.76■■■□□ 2.04
CIITAP33076 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
CIITAP33076 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CIITAP33076 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CIITAP33076 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
CIITAP33076 RAP2CP1-202ENST00000605179 643 ntBASIC27.76■■■□□ 2.03
CIITAP33076 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
CIITAP33076 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.76■■■□□ 2.03
CIITAP33076 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
CIITAP33076 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.75■■■□□ 2.03
CIITAP33076 AC009831.1-201ENST00000580420 1582 ntBASIC27.75■■■□□ 2.03
CIITAP33076 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CIITAP33076 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CIITAP33076 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CIITAP33076 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CIITAP33076 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.73■■■□□ 2.03
CIITAP33076 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CIITAP33076 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CIITAP33076 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
CIITAP33076 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.72■■■□□ 2.03
CIITAP33076 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CIITAP33076 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CIITAP33076 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CIITAP33076 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.71■■■□□ 2.03
CIITAP33076 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CIITAP33076 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CIITAP33076 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.71■■■□□ 2.03
CIITAP33076 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CIITAP33076 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.7■■■□□ 2.02
CIITAP33076 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.7■■■□□ 2.02
CIITAP33076 AC133552.2-201ENST00000619106 1032 ntBASIC27.7■■■□□ 2.02
CIITAP33076 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.02
CIITAP33076 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
CIITAP33076 AL121749.1-202ENST00000609313 2153 ntBASIC27.69■■■□□ 2.02
CIITAP33076 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CIITAP33076 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
CIITAP33076 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
CIITAP33076 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CIITAP33076 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CIITAP33076 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CIITAP33076 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.68■■■□□ 2.02
CIITAP33076 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CIITAP33076 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.67■■■□□ 2.02
CIITAP33076 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.67■■■□□ 2.02
CIITAP33076 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CIITAP33076 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CIITAP33076 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.67■■■□□ 2.02
CIITAP33076 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CIITAP33076 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms