Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PF4V1P10720 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PF4V1P10720 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PF4V1P10720 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PF4V1P10720 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PF4V1P10720 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PF4V1P10720 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PF4V1P10720 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PF4V1P10720 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.34■□□□□ 0.69
PF4V1P10720 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PF4V1P10720 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PF4V1P10720 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PF4V1P10720 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.33■□□□□ 0.69
PF4V1P10720 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.33■□□□□ 0.68
PF4V1P10720 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PF4V1P10720 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
PF4V1P10720 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PF4V1P10720 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.31■□□□□ 0.68
PF4V1P10720 TSPY13P-201ENST00000338964 914 ntBASIC19.31■□□□□ 0.68
PF4V1P10720 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PF4V1P10720 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.31■□□□□ 0.68
PF4V1P10720 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PF4V1P10720 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PF4V1P10720 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PF4V1P10720 AL449106.1-201ENST00000608517 1980 ntBASIC19.3■□□□□ 0.68
PF4V1P10720 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PF4V1P10720 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.3■□□□□ 0.68
PF4V1P10720 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
PF4V1P10720 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PF4V1P10720 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PF4V1P10720 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PF4V1P10720 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PF4V1P10720 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PF4V1P10720 AL157400.5-201ENST00000507624 621 ntBASIC19.29■□□□□ 0.68
PF4V1P10720 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PF4V1P10720 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.29■□□□□ 0.68
PF4V1P10720 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PF4V1P10720 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PF4V1P10720 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PF4V1P10720 KRT18P60-201ENST00000312876 1297 ntBASIC19.28■□□□□ 0.68
PF4V1P10720 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.28■□□□□ 0.68
PF4V1P10720 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.28■□□□□ 0.68
PF4V1P10720 AC007029.1-201ENST00000604183 313 ntBASIC19.28■□□□□ 0.68
PF4V1P10720 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.28■□□□□ 0.68
PF4V1P10720 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.28■□□□□ 0.68
PF4V1P10720 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PF4V1P10720 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PF4V1P10720 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PF4V1P10720 ATP5G2P3-201ENST00000429083 425 ntBASIC19.27■□□□□ 0.68
PF4V1P10720 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.27■□□□□ 0.68
PF4V1P10720 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.27■□□□□ 0.68
PF4V1P10720 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PF4V1P10720 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PF4V1P10720 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PF4V1P10720 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PF4V1P10720 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PF4V1P10720 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PF4V1P10720 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 AC004987.1-201ENST00000428627 508 ntBASIC19.26■□□□□ 0.67
PF4V1P10720 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
PF4V1P10720 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PF4V1P10720 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PF4V1P10720 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PF4V1P10720 SMPD5-203ENST00000639008 1464 ntBASIC19.25■□□□□ 0.67
PF4V1P10720 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PF4V1P10720 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PF4V1P10720 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.25■□□□□ 0.67
PF4V1P10720 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.25■□□□□ 0.67
PF4V1P10720 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PF4V1P10720 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PF4V1P10720 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
PF4V1P10720 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PF4V1P10720 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PF4V1P10720 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PF4V1P10720 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PF4V1P10720 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PF4V1P10720 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PF4V1P10720 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PF4V1P10720 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PF4V1P10720 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.22■□□□□ 0.67
PF4V1P10720 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PF4V1P10720 AL359504.2-201ENST00000605506 1601 ntBASIC19.22■□□□□ 0.67
PF4V1P10720 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.22■□□□□ 0.67
PF4V1P10720 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PF4V1P10720 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.22■□□□□ 0.67
PF4V1P10720 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PF4V1P10720 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PF4V1P10720 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PF4V1P10720 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PF4V1P10720 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.21■□□□□ 0.67
PF4V1P10720 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PF4V1P10720 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.21■□□□□ 0.67
PF4V1P10720 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.21■□□□□ 0.67
PF4V1P10720 AC133552.2-201ENST00000619106 1032 ntBASIC19.21■□□□□ 0.67
PF4V1P10720 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PF4V1P10720 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms