Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHGBP05060 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHGBP05060 ECEL1P2-201ENST00000461596 1295 ntBASIC29.76■■■□□ 2.35
CHGBP05060 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CHGBP05060 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHGBP05060 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CHGBP05060 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.75■■■□□ 2.35
CHGBP05060 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC29.74■■■□□ 2.35
CHGBP05060 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHGBP05060 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
CHGBP05060 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHGBP05060 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHGBP05060 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHGBP05060 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHGBP05060 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.73■■■□□ 2.35
CHGBP05060 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHGBP05060 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.73■■■□□ 2.35
CHGBP05060 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CHGBP05060 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CHGBP05060 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.72■■■□□ 2.35
CHGBP05060 AC025884.2-201ENST00000553429 711 ntBASIC29.72■■■□□ 2.35
CHGBP05060 AP004609.3-201ENST00000610705 1884 ntBASIC29.72■■■□□ 2.35
CHGBP05060 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHGBP05060 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.71■■■□□ 2.35
CHGBP05060 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CHGBP05060 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHGBP05060 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHGBP05060 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CHGBP05060 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
CHGBP05060 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
CHGBP05060 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHGBP05060 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHGBP05060 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.69■■■□□ 2.34
CHGBP05060 SMPD5-203ENST00000639008 1464 ntBASIC29.68■■■□□ 2.34
CHGBP05060 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CHGBP05060 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
CHGBP05060 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CHGBP05060 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.67■■■□□ 2.34
CHGBP05060 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHGBP05060 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHGBP05060 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.66■■■□□ 2.34
CHGBP05060 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
CHGBP05060 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHGBP05060 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHGBP05060 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHGBP05060 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.65■■■□□ 2.34
CHGBP05060 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CHGBP05060 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.64■■■□□ 2.34
CHGBP05060 U85056.1-201ENST00000616429 682 ntBASIC29.64■■■□□ 2.34
CHGBP05060 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
CHGBP05060 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
CHGBP05060 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.63■■■□□ 2.33
CHGBP05060 AC007029.1-201ENST00000604183 313 ntBASIC29.63■■■□□ 2.33
CHGBP05060 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
CHGBP05060 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
CHGBP05060 AC142472.1-201ENST00000612013 1741 ntBASIC29.62■■■□□ 2.33
CHGBP05060 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.62■■■□□ 2.33
CHGBP05060 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.62■■■□□ 2.33
CHGBP05060 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.61■■■□□ 2.33
CHGBP05060 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CHGBP05060 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CHGBP05060 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.61■■■□□ 2.33
CHGBP05060 ABHD17AP5-201ENST00000580133 923 ntBASIC29.61■■■□□ 2.33
CHGBP05060 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
CHGBP05060 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.61■■■□□ 2.33
CHGBP05060 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
CHGBP05060 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CHGBP05060 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CHGBP05060 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CHGBP05060 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHGBP05060 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHGBP05060 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CHGBP05060 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.58■■■□□ 2.33
CHGBP05060 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CHGBP05060 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
CHGBP05060 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CHGBP05060 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.57■■■□□ 2.32
CHGBP05060 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
CHGBP05060 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHGBP05060 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.57■■■□□ 2.32
CHGBP05060 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHGBP05060 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CHGBP05060 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHGBP05060 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHGBP05060 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CHGBP05060 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CHGBP05060 AC009831.1-201ENST00000580420 1582 ntBASIC29.56■■■□□ 2.32
CHGBP05060 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHGBP05060 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHGBP05060 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHGBP05060 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.55■■■□□ 2.32
CHGBP05060 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CHGBP05060 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC29.55■■■□□ 2.32
CHGBP05060 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHGBP05060 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
CHGBP05060 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CHGBP05060 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.54■■■□□ 2.32
CHGBP05060 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHGBP05060 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
CHGBP05060 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 798.6 ms