Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TCRBP04435 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBP04435 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBP04435 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBP04435 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBP04435 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.87■□□□□ 0.93
TCRBP04435 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TCRBP04435 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.87■□□□□ 0.93
TCRBP04435 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.86■□□□□ 0.93
TCRBP04435 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TCRBP04435 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBP04435 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
TCRBP04435 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBP04435 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBP04435 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBP04435 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TCRBP04435 AC022211.4-201ENST00000625094 2161 ntBASIC20.85■□□□□ 0.93
TCRBP04435 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.84■□□□□ 0.93
TCRBP04435 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBP04435 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBP04435 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBP04435 AC068473.5-201ENST00000616428 2072 ntBASIC20.84■□□□□ 0.93
TCRBP04435 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.83■□□□□ 0.93
TCRBP04435 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBP04435 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBP04435 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBP04435 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBP04435 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBP04435 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBP04435 LINC00543-201ENST00000567234 1845 ntBASIC20.83■□□□□ 0.92
TCRBP04435 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.83■□□□□ 0.92
TCRBP04435 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBP04435 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBP04435 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TCRBP04435 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.82■□□□□ 0.92
TCRBP04435 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
TCRBP04435 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBP04435 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBP04435 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBP04435 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TCRBP04435 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBP04435 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBP04435 AC079834.2-201ENST00000609776 1949 ntBASIC20.81■□□□□ 0.92
TCRBP04435 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TCRBP04435 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TCRBP04435 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBP04435 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TCRBP04435 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBP04435 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBP04435 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TCRBP04435 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBP04435 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBP04435 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBP04435 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBP04435 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBP04435 AC010501.1-201ENST00000606270 1962 ntBASIC20.79■□□□□ 0.92
TCRBP04435 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBP04435 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 AC142472.1-201ENST00000612013 1741 ntBASIC20.78■□□□□ 0.92
TCRBP04435 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBP04435 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBP04435 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBP04435 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TCRBP04435 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.75■□□□□ 0.91
TCRBP04435 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBP04435 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBP04435 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBP04435 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBP04435 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBP04435 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TCRBP04435 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBP04435 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.73■□□□□ 0.91
TCRBP04435 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBP04435 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TCRBP04435 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBP04435 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBP04435 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBP04435 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBP04435 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBP04435 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBP04435 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBP04435 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBP04435 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.7■□□□□ 0.9
TCRBP04435 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms