Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CD4P01730 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.46■■□□□ 1.99
CD4P01730 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.46■■□□□ 1.99
CD4P01730 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
CD4P01730 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.45■■□□□ 1.98
CD4P01730 GUSBP5-201ENST00000418136 578 ntBASIC27.45■■□□□ 1.98
CD4P01730 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.45■■□□□ 1.98
CD4P01730 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CD4P01730 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
CD4P01730 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.44■■□□□ 1.98
CD4P01730 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CD4P01730 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CD4P01730 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CD4P01730 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.43■■□□□ 1.98
CD4P01730 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CD4P01730 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.43■■□□□ 1.98
CD4P01730 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
CD4P01730 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CD4P01730 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CD4P01730 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.42■■□□□ 1.98
CD4P01730 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CD4P01730 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.42■■□□□ 1.98
CD4P01730 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CD4P01730 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.41■■□□□ 1.98
CD4P01730 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CD4P01730 AC131212.1-201ENST00000613771 668 ntBASIC27.41■■□□□ 1.98
CD4P01730 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.98
CD4P01730 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CD4P01730 AC019069.1-201ENST00000610008 1333 ntBASIC27.41■■□□□ 1.98
CD4P01730 ABCB10P3-201ENST00000561950 2166 ntBASIC27.41■■□□□ 1.98
CD4P01730 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CD4P01730 THA1P-201ENST00000590384 1145 ntBASIC27.4■■□□□ 1.98
CD4P01730 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CD4P01730 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CD4P01730 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CD4P01730 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CD4P01730 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.38■■□□□ 1.97
CD4P01730 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CD4P01730 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
CD4P01730 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.38■■□□□ 1.97
CD4P01730 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CD4P01730 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CD4P01730 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CD4P01730 AP002414.2-202ENST00000590929 1450 ntBASIC27.37■■□□□ 1.97
CD4P01730 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CD4P01730 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CD4P01730 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
CD4P01730 AC103724.3-201ENST00000564481 992 ntBASIC27.36■■□□□ 1.97
CD4P01730 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CD4P01730 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.36■■□□□ 1.97
CD4P01730 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.36■■□□□ 1.97
CD4P01730 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.36■■□□□ 1.97
CD4P01730 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CD4P01730 PRTG-204ENST00000561292 833 ntTSL 3 BASIC27.35■■□□□ 1.97
CD4P01730 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.35■■□□□ 1.97
CD4P01730 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CD4P01730 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CD4P01730 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.34■■□□□ 1.97
CD4P01730 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CD4P01730 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CD4P01730 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.33■■□□□ 1.97
CD4P01730 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CD4P01730 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.33■■□□□ 1.97
CD4P01730 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CD4P01730 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CD4P01730 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.33■■□□□ 1.97
CD4P01730 AL359504.2-201ENST00000605506 1601 ntBASIC27.32■■□□□ 1.96
CD4P01730 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CD4P01730 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CD4P01730 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CD4P01730 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CD4P01730 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CD4P01730 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.32■■□□□ 1.96
CD4P01730 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.31■■□□□ 1.96
CD4P01730 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CD4P01730 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CD4P01730 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.3■■□□□ 1.96
CD4P01730 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC27.3■■□□□ 1.96
CD4P01730 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.3■■□□□ 1.96
CD4P01730 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CD4P01730 AL031848.2-201ENST00000607670 837 ntBASIC27.3■■□□□ 1.96
CD4P01730 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CD4P01730 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CD4P01730 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CD4P01730 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CD4P01730 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CD4P01730 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
CD4P01730 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CD4P01730 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CD4P01730 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CD4P01730 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.28■■□□□ 1.96
CD4P01730 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CD4P01730 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CD4P01730 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CD4P01730 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
CD4P01730 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CD4P01730 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CD4P01730 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.26■■□□□ 1.95
CD4P01730 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.26■■□□□ 1.95
CD4P01730 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms