Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
ALDH1A1P00352 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ALDH1A1P00352 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ALDH1A1P00352 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
ALDH1A1P00352 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.7■■■□□ 2.18
ALDH1A1P00352 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC28.7■■■□□ 2.18
ALDH1A1P00352 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.7■■■□□ 2.18
ALDH1A1P00352 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
ALDH1A1P00352 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.18
ALDH1A1P00352 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
ALDH1A1P00352 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
ALDH1A1P00352 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC28.69■■■□□ 2.18
ALDH1A1P00352 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ALDH1A1P00352 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ALDH1A1P00352 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.67■■■□□ 2.18
ALDH1A1P00352 KRT125P-201ENST00000546827 989 ntBASIC28.67■■■□□ 2.18
ALDH1A1P00352 AC087393.1-201ENST00000582896 145 ntBASIC28.67■■■□□ 2.18
ALDH1A1P00352 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ALDH1A1P00352 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ALDH1A1P00352 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.66■■■□□ 2.18
ALDH1A1P00352 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ALDH1A1P00352 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.66■■■□□ 2.18
ALDH1A1P00352 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ALDH1A1P00352 MIR638-201ENST00000385237 100 ntBASIC28.65■■■□□ 2.18
ALDH1A1P00352 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.65■■■□□ 2.18
ALDH1A1P00352 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC28.64■■■□□ 2.18
ALDH1A1P00352 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.64■■■□□ 2.18
ALDH1A1P00352 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
ALDH1A1P00352 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
ALDH1A1P00352 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ALDH1A1P00352 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.63■■■□□ 2.17
ALDH1A1P00352 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.63■■■□□ 2.17
ALDH1A1P00352 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
ALDH1A1P00352 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ALDH1A1P00352 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.62■■■□□ 2.17
ALDH1A1P00352 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ALDH1A1P00352 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ALDH1A1P00352 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.62■■■□□ 2.17
ALDH1A1P00352 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ALDH1A1P00352 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.61■■■□□ 2.17
ALDH1A1P00352 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ALDH1A1P00352 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ALDH1A1P00352 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
ALDH1A1P00352 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
ALDH1A1P00352 LONRF2P2-201ENST00000439212 571 ntBASIC28.6■■■□□ 2.17
ALDH1A1P00352 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.6■■■□□ 2.17
ALDH1A1P00352 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC28.6■■■□□ 2.17
ALDH1A1P00352 MIR4787-201ENST00000607364 84 ntBASIC28.6■■■□□ 2.17
ALDH1A1P00352 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ALDH1A1P00352 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ALDH1A1P00352 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.59■■■□□ 2.17
ALDH1A1P00352 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ALDH1A1P00352 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ALDH1A1P00352 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
ALDH1A1P00352 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ALDH1A1P00352 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
ALDH1A1P00352 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.58■■■□□ 2.17
ALDH1A1P00352 BX664725.1-201ENST00000438252 379 ntBASIC28.58■■■□□ 2.17
ALDH1A1P00352 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ALDH1A1P00352 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
ALDH1A1P00352 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
ALDH1A1P00352 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.56■■■□□ 2.16
ALDH1A1P00352 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
ALDH1A1P00352 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ALDH1A1P00352 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.55■■■□□ 2.16
ALDH1A1P00352 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
ALDH1A1P00352 AL139246.5-201ENST00000606645 996 ntBASIC28.55■■■□□ 2.16
ALDH1A1P00352 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ALDH1A1P00352 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ALDH1A1P00352 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ALDH1A1P00352 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
ALDH1A1P00352 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
ALDH1A1P00352 KRT16P3-201ENST00000439127 1283 ntBASIC28.54■■■□□ 2.16
ALDH1A1P00352 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
ALDH1A1P00352 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ALDH1A1P00352 AL359504.2-201ENST00000605506 1601 ntBASIC28.54■■■□□ 2.16
ALDH1A1P00352 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ALDH1A1P00352 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
ALDH1A1P00352 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ALDH1A1P00352 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ALDH1A1P00352 RPS2P7-201ENST00000447334 885 ntBASIC28.52■■■□□ 2.16
ALDH1A1P00352 UNC93B8-201ENST00000511903 705 ntBASIC28.52■■■□□ 2.16
ALDH1A1P00352 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.52■■■□□ 2.16
ALDH1A1P00352 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.52■■■□□ 2.16
ALDH1A1P00352 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ALDH1A1P00352 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
ALDH1A1P00352 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ALDH1A1P00352 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ALDH1A1P00352 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
ALDH1A1P00352 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ALDH1A1P00352 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.5■■■□□ 2.15
ALDH1A1P00352 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ALDH1A1P00352 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ALDH1A1P00352 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ALDH1A1P00352 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.49■■■□□ 2.15
ALDH1A1P00352 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ALDH1A1P00352 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.48■■■□□ 2.15
ALDH1A1P00352 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ALDH1A1P00352 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ALDH1A1P00352 AC022616.5-201ENST00000518796 181 ntBASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms