Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.69■■□□□ 1.38
SNRNP200O75643 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.69■■□□□ 1.38
SNRNP200O75643 KRT18P60-201ENST00000312876 1297 ntBASIC23.69■■□□□ 1.38
SNRNP200O75643 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.69■■□□□ 1.38
SNRNP200O75643 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.69■■□□□ 1.38
SNRNP200O75643 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SNRNP200O75643 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SNRNP200O75643 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.68■■□□□ 1.38
SNRNP200O75643 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNRNP200O75643 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SNRNP200O75643 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SNRNP200O75643 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SNRNP200O75643 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.67■■□□□ 1.38
SNRNP200O75643 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
SNRNP200O75643 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SNRNP200O75643 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNRNP200O75643 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.66■■□□□ 1.38
SNRNP200O75643 RAP2CP1-202ENST00000605179 643 ntBASIC23.66■■□□□ 1.38
SNRNP200O75643 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNRNP200O75643 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNRNP200O75643 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SNRNP200O75643 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SNRNP200O75643 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.65■■□□□ 1.38
SNRNP200O75643 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNRNP200O75643 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.64■■□□□ 1.38
SNRNP200O75643 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNRNP200O75643 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SNRNP200O75643 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNRNP200O75643 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.64■■□□□ 1.37
SNRNP200O75643 ECEL1P2-201ENST00000461596 1295 ntBASIC23.63■■□□□ 1.37
SNRNP200O75643 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.63■■□□□ 1.37
SNRNP200O75643 NTF6A-201ENST00000591175 560 ntBASIC23.63■■□□□ 1.37
SNRNP200O75643 AC007029.1-201ENST00000604183 313 ntBASIC23.63■■□□□ 1.37
SNRNP200O75643 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNRNP200O75643 AL121749.1-202ENST00000609313 2153 ntBASIC23.63■■□□□ 1.37
SNRNP200O75643 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNRNP200O75643 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNRNP200O75643 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNRNP200O75643 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SNRNP200O75643 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNRNP200O75643 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.62■■□□□ 1.37
SNRNP200O75643 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.62■■□□□ 1.37
SNRNP200O75643 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNRNP200O75643 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SNRNP200O75643 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SNRNP200O75643 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SNRNP200O75643 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNRNP200O75643 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNRNP200O75643 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNRNP200O75643 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNRNP200O75643 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.6■■□□□ 1.37
SNRNP200O75643 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SNRNP200O75643 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SNRNP200O75643 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SNRNP200O75643 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNRNP200O75643 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNRNP200O75643 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNRNP200O75643 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SNRNP200O75643 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNRNP200O75643 SMPD5-203ENST00000639008 1464 ntBASIC23.58■■□□□ 1.36
SNRNP200O75643 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SNRNP200O75643 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
SNRNP200O75643 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SNRNP200O75643 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNRNP200O75643 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNRNP200O75643 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SNRNP200O75643 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SNRNP200O75643 AC142472.1-201ENST00000612013 1741 ntBASIC23.57■■□□□ 1.36
SNRNP200O75643 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SNRNP200O75643 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNRNP200O75643 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNRNP200O75643 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNRNP200O75643 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.55■■□□□ 1.36
SNRNP200O75643 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.55■■□□□ 1.36
SNRNP200O75643 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
SNRNP200O75643 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SNRNP200O75643 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.54■■□□□ 1.36
SNRNP200O75643 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.54■■□□□ 1.36
SNRNP200O75643 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNRNP200O75643 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNRNP200O75643 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SNRNP200O75643 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNRNP200O75643 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
SNRNP200O75643 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNRNP200O75643 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SNRNP200O75643 AC133552.2-201ENST00000619106 1032 ntBASIC23.53■■□□□ 1.36
SNRNP200O75643 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SNRNP200O75643 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.53■■□□□ 1.36
SNRNP200O75643 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SNRNP200O75643 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SNRNP200O75643 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SNRNP200O75643 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms