Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI2O43623 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI2O43623 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.12■□□□□ 0.49
SNAI2O43623 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNAI2O43623 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 AC005559.1-201ENST00000589661 871 ntBASIC18.11■□□□□ 0.49
SNAI2O43623 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNAI2O43623 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI2O43623 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAI2O43623 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAI2O43623 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 AC142472.1-201ENST00000612013 1741 ntBASIC18.09■□□□□ 0.49
SNAI2O43623 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SNAI2O43623 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI2O43623 MIR6090-201ENST00000622481 60 ntBASIC18.08■□□□□ 0.48
SNAI2O43623 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAI2O43623 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.08■□□□□ 0.48
SNAI2O43623 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI2O43623 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI2O43623 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI2O43623 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
SNAI2O43623 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNAI2O43623 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.05■□□□□ 0.48
SNAI2O43623 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNAI2O43623 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNAI2O43623 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNAI2O43623 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI2O43623 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.04■□□□□ 0.48
SNAI2O43623 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI2O43623 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.03■□□□□ 0.48
SNAI2O43623 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SNAI2O43623 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI2O43623 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAI2O43623 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.01■□□□□ 0.47
SNAI2O43623 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNAI2O43623 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI2O43623 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.01■□□□□ 0.47
SNAI2O43623 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI2O43623 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.01■□□□□ 0.47
SNAI2O43623 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms