Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHOXO15266 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHOXO15266 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
SHOXO15266 MIR3665-201ENST00000578708 105 ntBASIC20.73■□□□□ 0.91
SHOXO15266 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.73■□□□□ 0.91
SHOXO15266 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHOXO15266 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
SHOXO15266 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SHOXO15266 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHOXO15266 DUX4L28-201ENST00000623687 678 ntBASIC20.72■□□□□ 0.91
SHOXO15266 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.71■□□□□ 0.91
SHOXO15266 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHOXO15266 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHOXO15266 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SHOXO15266 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHOXO15266 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHOXO15266 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHOXO15266 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHOXO15266 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHOXO15266 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.69■□□□□ 0.9
SHOXO15266 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.68■□□□□ 0.9
SHOXO15266 AP006261.1-201ENST00000584783 668 ntBASIC20.68■□□□□ 0.9
SHOXO15266 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 AL024507.2-201ENST00000606070 2574 ntBASIC20.68■□□□□ 0.9
SHOXO15266 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHOXO15266 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SHOXO15266 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHOXO15266 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SHOXO15266 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHOXO15266 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHOXO15266 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHOXO15266 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.66■□□□□ 0.9
SHOXO15266 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHOXO15266 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.66■□□□□ 0.9
SHOXO15266 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SHOXO15266 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHOXO15266 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHOXO15266 AC100797.4-201ENST00000631653 1827 ntBASIC20.64■□□□□ 0.9
SHOXO15266 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHOXO15266 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.64■□□□□ 0.9
SHOXO15266 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHOXO15266 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.64■□□□□ 0.89
SHOXO15266 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHOXO15266 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.64■□□□□ 0.89
SHOXO15266 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHOXO15266 MIR6090-201ENST00000622481 60 ntBASIC20.64■□□□□ 0.89
SHOXO15266 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHOXO15266 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHOXO15266 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.64■□□□□ 0.89
SHOXO15266 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHOXO15266 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHOXO15266 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHOXO15266 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.63■□□□□ 0.89
SHOXO15266 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.63■□□□□ 0.89
SHOXO15266 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHOXO15266 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHOXO15266 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHOXO15266 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHOXO15266 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SHOXO15266 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.62■□□□□ 0.89
SHOXO15266 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHOXO15266 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SHOXO15266 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SHOXO15266 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHOXO15266 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHOXO15266 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHOXO15266 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.6■□□□□ 0.89
SHOXO15266 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHOXO15266 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SHOXO15266 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.59■□□□□ 0.89
SHOXO15266 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHOXO15266 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHOXO15266 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHOXO15266 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.58■□□□□ 0.89
SHOXO15266 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHOXO15266 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SHOXO15266 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.58■□□□□ 0.89
SHOXO15266 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHOXO15266 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHOXO15266 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHOXO15266 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SHOXO15266 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms