Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TSPAN4O14817 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TSPAN4O14817 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN4O14817 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN4O14817 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN4O14817 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN4O14817 AC068473.5-201ENST00000616428 2072 ntBASIC20.24■□□□□ 0.83
TSPAN4O14817 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TSPAN4O14817 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.23■□□□□ 0.83
TSPAN4O14817 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TSPAN4O14817 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN4O14817 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.23■□□□□ 0.83
TSPAN4O14817 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.23■□□□□ 0.83
TSPAN4O14817 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN4O14817 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TSPAN4O14817 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TSPAN4O14817 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN4O14817 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.22■□□□□ 0.83
TSPAN4O14817 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN4O14817 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN4O14817 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TSPAN4O14817 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.21■□□□□ 0.83
TSPAN4O14817 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TSPAN4O14817 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 AL135925.1-201ENST00000605920 1701 ntBASIC20.21■□□□□ 0.83
TSPAN4O14817 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN4O14817 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN4O14817 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN4O14817 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN4O14817 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TSPAN4O14817 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN4O14817 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN4O14817 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN4O14817 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.19■□□□□ 0.82
TSPAN4O14817 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN4O14817 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN4O14817 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN4O14817 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN4O14817 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN4O14817 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TSPAN4O14817 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN4O14817 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN4O14817 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN4O14817 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN4O14817 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN4O14817 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.17■□□□□ 0.82
TSPAN4O14817 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.17■□□□□ 0.82
TSPAN4O14817 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.16■□□□□ 0.82
TSPAN4O14817 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN4O14817 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN4O14817 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSPAN4O14817 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN4O14817 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TSPAN4O14817 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN4O14817 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.15■□□□□ 0.82
TSPAN4O14817 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN4O14817 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSPAN4O14817 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
TSPAN4O14817 PKD1P6-201ENST00000343738 4769 ntBASIC20.14■□□□□ 0.82
TSPAN4O14817 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.14■□□□□ 0.82
TSPAN4O14817 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN4O14817 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.14■□□□□ 0.81
TSPAN4O14817 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TSPAN4O14817 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN4O14817 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN4O14817 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TSPAN4O14817 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TSPAN4O14817 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
TSPAN4O14817 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN4O14817 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TSPAN4O14817 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSPAN4O14817 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.13■□□□□ 0.81
TSPAN4O14817 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN4O14817 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN4O14817 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TSPAN4O14817 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TSPAN4O14817 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN4O14817 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN4O14817 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.12■□□□□ 0.81
TSPAN4O14817 MIR762-201ENST00000390236 83 ntBASIC20.12■□□□□ 0.81
TSPAN4O14817 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.12■□□□□ 0.81
TSPAN4O14817 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSPAN4O14817 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.11■□□□□ 0.81
TSPAN4O14817 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TSPAN4O14817 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms