Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
CHD2O14647 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC35.11■■■■□ 3.21
CHD2O14647 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD2O14647 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD2O14647 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD2O14647 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CHD2O14647 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC35.11■■■■□ 3.21
CHD2O14647 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.1■■■■□ 3.21
CHD2O14647 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC35.1■■■■□ 3.21
CHD2O14647 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC35.09■■■■□ 3.21
CHD2O14647 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
CHD2O14647 TK2-216ENST00000564917 1156 ntTSL 3 BASIC35.09■■■■□ 3.21
CHD2O14647 AC018755.3-202ENST00000596210 929 ntBASIC35.09■■■■□ 3.21
CHD2O14647 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC35.08■■■■□ 3.21
CHD2O14647 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
CHD2O14647 AC019171.1-201ENST00000601251 1056 ntBASIC35.07■■■■□ 3.2
CHD2O14647 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC35.06■■■■□ 3.2
CHD2O14647 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
CHD2O14647 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
CHD2O14647 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC35.06■■■■□ 3.2
CHD2O14647 CREM-229ENST00000474362 1030 ntTSL 2 BASIC35.06■■■■□ 3.2
CHD2O14647 GRAMD4P7-201ENST00000578182 1232 ntBASIC35.06■■■■□ 3.2
CHD2O14647 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD2O14647 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD2O14647 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
CHD2O14647 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC35.04■■■■□ 3.2
CHD2O14647 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD2O14647 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD2O14647 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD2O14647 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
CHD2O14647 AC239859.2-201ENST00000444165 318 ntBASIC35.04■■■■□ 3.2
CHD2O14647 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC35.04■■■■□ 3.2
CHD2O14647 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC35.03■■■■□ 3.2
CHD2O14647 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
CHD2O14647 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHD2O14647 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.02■■■■□ 3.2
CHD2O14647 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHD2O14647 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CHD2O14647 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
CHD2O14647 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC35.01■■■■□ 3.19
CHD2O14647 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
CHD2O14647 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC35■■■■□ 3.19
CHD2O14647 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC35■■■■□ 3.19
CHD2O14647 ST7-AS1-201ENST00000456775 1889 ntBASIC35■■■■□ 3.19
CHD2O14647 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC35■■■■□ 3.19
CHD2O14647 AL359504.2-201ENST00000605506 1601 ntBASIC34.99■■■■□ 3.19
CHD2O14647 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
CHD2O14647 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
CHD2O14647 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
CHD2O14647 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC34.98■■■■□ 3.19
CHD2O14647 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CHD2O14647 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CHD2O14647 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
CHD2O14647 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
CHD2O14647 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
CHD2O14647 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
CHD2O14647 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
CHD2O14647 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CHD2O14647 AC087393.1-201ENST00000582896 145 ntBASIC34.95■■■■□ 3.19
CHD2O14647 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
CHD2O14647 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CHD2O14647 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC34.95■■■■□ 3.18
CHD2O14647 AC008406.3-201ENST00000620001 1374 ntBASIC34.94■■■■□ 3.18
CHD2O14647 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC34.94■■■■□ 3.18
CHD2O14647 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CHD2O14647 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC34.93■■■■□ 3.18
CHD2O14647 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CHD2O14647 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
CHD2O14647 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CHD2O14647 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CHD2O14647 MIR638-201ENST00000385237 100 ntBASIC34.92■■■■□ 3.18
CHD2O14647 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC34.91■■■■□ 3.18
CHD2O14647 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC34.9■■■■□ 3.18
CHD2O14647 AP002414.2-202ENST00000590929 1450 ntBASIC34.9■■■■□ 3.18
CHD2O14647 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CHD2O14647 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
CHD2O14647 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CHD2O14647 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC34.89■■■■□ 3.18
CHD2O14647 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
CHD2O14647 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CHD2O14647 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC34.88■■■■□ 3.17
CHD2O14647 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC34.87■■■■□ 3.17
CHD2O14647 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC34.87■■■■□ 3.17
CHD2O14647 UNC93B8-201ENST00000511903 705 ntBASIC34.87■■■■□ 3.17
CHD2O14647 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC34.87■■■■□ 3.17
CHD2O14647 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC34.87■■■■□ 3.17
CHD2O14647 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
CHD2O14647 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
CHD2O14647 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CHD2O14647 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC34.85■■■■□ 3.17
CHD2O14647 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC34.85■■■■□ 3.17
CHD2O14647 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC34.84■■■■□ 3.17
CHD2O14647 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CHD2O14647 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC34.83■■■■□ 3.17
CHD2O14647 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CHD2O14647 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CHD2O14647 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.83■■■■□ 3.17
CHD2O14647 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC34.83■■■■□ 3.17
CHD2O14647 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CHD2O14647 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms