Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC009831.1-201ENST00000580420 1582 ntBASIC31.94■■■□□ 2.7
CHL1O00533 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHL1O00533 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHL1O00533 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.94■■■□□ 2.7
CHL1O00533 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CHL1O00533 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CHL1O00533 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CHL1O00533 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHL1O00533 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHL1O00533 KRT18P60-201ENST00000312876 1297 ntBASIC31.91■■■□□ 2.7
CHL1O00533 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
CHL1O00533 AC093536.1-201ENST00000569153 554 ntBASIC31.91■■■□□ 2.7
CHL1O00533 MIR3960-201ENST00000583311 91 ntBASIC31.91■■■□□ 2.7
CHL1O00533 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHL1O00533 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.9■■■□□ 2.7
CHL1O00533 RAP2CP1-202ENST00000605179 643 ntBASIC31.9■■■□□ 2.7
CHL1O00533 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.9■■■□□ 2.7
CHL1O00533 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
CHL1O00533 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.89■■■□□ 2.7
CHL1O00533 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.89■■■□□ 2.7
CHL1O00533 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHL1O00533 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CHL1O00533 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.89■■■□□ 2.7
CHL1O00533 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHL1O00533 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHL1O00533 AC133552.2-201ENST00000619106 1032 ntBASIC31.88■■■□□ 2.69
CHL1O00533 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHL1O00533 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHL1O00533 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC31.87■■■□□ 2.69
CHL1O00533 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHL1O00533 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHL1O00533 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHL1O00533 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
CHL1O00533 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHL1O00533 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHL1O00533 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.86■■■□□ 2.69
CHL1O00533 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
CHL1O00533 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CHL1O00533 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHL1O00533 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHL1O00533 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CHL1O00533 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.85■■■□□ 2.69
CHL1O00533 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHL1O00533 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHL1O00533 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHL1O00533 AC142472.1-201ENST00000612013 1741 ntBASIC31.83■■■□□ 2.69
CHL1O00533 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHL1O00533 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHL1O00533 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.83■■■□□ 2.69
CHL1O00533 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
CHL1O00533 AL592293.1-201ENST00000502889 1188 ntBASIC31.82■■■□□ 2.68
CHL1O00533 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHL1O00533 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
CHL1O00533 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHL1O00533 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CHL1O00533 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHL1O00533 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CHL1O00533 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHL1O00533 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.8■■■□□ 2.68
CHL1O00533 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHL1O00533 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
CHL1O00533 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.8■■■□□ 2.68
CHL1O00533 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.79■■■□□ 2.68
CHL1O00533 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CHL1O00533 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.78■■■□□ 2.68
CHL1O00533 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CHL1O00533 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
CHL1O00533 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHL1O00533 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHL1O00533 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.77■■■□□ 2.68
CHL1O00533 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHL1O00533 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHL1O00533 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHL1O00533 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
CHL1O00533 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.77■■■□□ 2.68
CHL1O00533 AC012354.3-201ENST00000623734 483 ntBASIC31.77■■■□□ 2.68
CHL1O00533 AP004609.3-201ENST00000610705 1884 ntBASIC31.77■■■□□ 2.68
CHL1O00533 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CHL1O00533 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHL1O00533 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHL1O00533 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHL1O00533 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHL1O00533 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHL1O00533 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHL1O00533 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.75■■■□□ 2.67
CHL1O00533 AC129492.7-201ENST00000622992 756 ntBASIC31.75■■■□□ 2.67
CHL1O00533 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHL1O00533 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHL1O00533 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHL1O00533 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.72■■■□□ 2.67
CHL1O00533 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHL1O00533 AC004987.1-201ENST00000428627 508 ntBASIC31.71■■■□□ 2.67
CHL1O00533 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
CHL1O00533 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CHL1O00533 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CHL1O00533 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.68■■■□□ 2.66
CHL1O00533 ATP5G2P3-201ENST00000429083 425 ntBASIC31.68■■■□□ 2.66
CHL1O00533 SPCS2P3-201ENST00000500401 656 ntBASIC31.68■■■□□ 2.66
CHL1O00533 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
CHL1O00533 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms