Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
C1QTNF9BB2RNN3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
C1QTNF9BB2RNN3 AC131281.2-201ENST00000520478 145 ntBASIC23.55■■□□□ 1.36
C1QTNF9BB2RNN3 AC019171.1-201ENST00000601251 1056 ntBASIC23.55■■□□□ 1.36
C1QTNF9BB2RNN3 AC110285.6-201ENST00000617652 491 ntBASIC23.55■■□□□ 1.36
C1QTNF9BB2RNN3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
C1QTNF9BB2RNN3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
C1QTNF9BB2RNN3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 BX664725.1-201ENST00000438252 379 ntBASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.53■■□□□ 1.36
C1QTNF9BB2RNN3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 AL136116.3-201ENST00000402907 1138 ntBASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
C1QTNF9BB2RNN3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.51■■□□□ 1.35
C1QTNF9BB2RNN3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.5■■□□□ 1.35
C1QTNF9BB2RNN3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
C1QTNF9BB2RNN3 AC104564.3-201ENST00000582367 638 ntBASIC23.49■■□□□ 1.35
C1QTNF9BB2RNN3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.49■■□□□ 1.35
C1QTNF9BB2RNN3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
C1QTNF9BB2RNN3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
C1QTNF9BB2RNN3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
C1QTNF9BB2RNN3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
C1QTNF9BB2RNN3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 TSPY9P-201ENST00000440215 945 ntBASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 TSPY11P-201ENST00000442607 1045 ntBASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.47■■□□□ 1.35
C1QTNF9BB2RNN3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.46■■□□□ 1.35
C1QTNF9BB2RNN3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.45■■□□□ 1.34
C1QTNF9BB2RNN3 ZNRF2P3-201ENST00000424200 374 ntBASIC23.44■■□□□ 1.34
C1QTNF9BB2RNN3 AC096631.2-201ENST00000436136 790 ntBASIC23.44■■□□□ 1.34
C1QTNF9BB2RNN3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.44■■□□□ 1.34
C1QTNF9BB2RNN3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.44■■□□□ 1.34
C1QTNF9BB2RNN3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
C1QTNF9BB2RNN3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.43■■□□□ 1.34
C1QTNF9BB2RNN3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
C1QTNF9BB2RNN3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
C1QTNF9BB2RNN3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.42■■□□□ 1.34
C1QTNF9BB2RNN3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.42■■□□□ 1.34
C1QTNF9BB2RNN3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.41■■□□□ 1.34
C1QTNF9BB2RNN3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 AC026271.2-201ENST00000428091 497 ntBASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 AC087393.1-201ENST00000582896 145 ntBASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
C1QTNF9BB2RNN3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.39■■□□□ 1.33
C1QTNF9BB2RNN3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.39■■□□□ 1.33
C1QTNF9BB2RNN3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.39■■□□□ 1.33
C1QTNF9BB2RNN3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms