Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMIM35A0A1B0GVV1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.2■■□□□ 1.94
SMIM35A0A1B0GVV1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SMIM35A0A1B0GVV1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMIM35A0A1B0GVV1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SMIM35A0A1B0GVV1 RARRES2P1-201ENST00000474487 481 ntBASIC27.18■■□□□ 1.94
SMIM35A0A1B0GVV1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SMIM35A0A1B0GVV1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMIM35A0A1B0GVV1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SMIM35A0A1B0GVV1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMIM35A0A1B0GVV1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMIM35A0A1B0GVV1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.16■■□□□ 1.94
SMIM35A0A1B0GVV1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.16■■□□□ 1.94
SMIM35A0A1B0GVV1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMIM35A0A1B0GVV1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMIM35A0A1B0GVV1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.14■■□□□ 1.94
SMIM35A0A1B0GVV1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.14■■□□□ 1.94
SMIM35A0A1B0GVV1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
SMIM35A0A1B0GVV1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.93
SMIM35A0A1B0GVV1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
SMIM35A0A1B0GVV1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 MIR6765-201ENST00000614092 87 ntBASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMIM35A0A1B0GVV1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SMIM35A0A1B0GVV1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.12■■□□□ 1.93
SMIM35A0A1B0GVV1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMIM35A0A1B0GVV1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMIM35A0A1B0GVV1 LINC01003-201ENST00000564834 1764 ntBASIC27.11■■□□□ 1.93
SMIM35A0A1B0GVV1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 AC018755.3-202ENST00000596210 929 ntBASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.1■■□□□ 1.93
SMIM35A0A1B0GVV1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMIM35A0A1B0GVV1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.09■■□□□ 1.93
SMIM35A0A1B0GVV1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SMIM35A0A1B0GVV1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.08■■□□□ 1.93
SMIM35A0A1B0GVV1 AC074183.2-201ENST00000623112 922 ntBASIC27.08■■□□□ 1.93
SMIM35A0A1B0GVV1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMIM35A0A1B0GVV1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SMIM35A0A1B0GVV1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SMIM35A0A1B0GVV1 BHLHE23-202ENST00000612929 1109 ntBASIC27.07■■□□□ 1.92
SMIM35A0A1B0GVV1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
SMIM35A0A1B0GVV1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.06■■□□□ 1.92
SMIM35A0A1B0GVV1 AL449106.1-201ENST00000608517 1980 ntBASIC27.06■■□□□ 1.92
SMIM35A0A1B0GVV1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMIM35A0A1B0GVV1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
SMIM35A0A1B0GVV1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.05■■□□□ 1.92
SMIM35A0A1B0GVV1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.05■■□□□ 1.92
SMIM35A0A1B0GVV1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.05■■□□□ 1.92
SMIM35A0A1B0GVV1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
SMIM35A0A1B0GVV1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMIM35A0A1B0GVV1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMIM35A0A1B0GVV1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 AC010980.1-201ENST00000587192 1142 ntBASIC27.03■■□□□ 1.92
SMIM35A0A1B0GVV1 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.02■■□□□ 1.92
SMIM35A0A1B0GVV1 AC139795.1-202ENST00000500444 432 ntBASIC27.02■■□□□ 1.92
SMIM35A0A1B0GVV1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SMIM35A0A1B0GVV1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SMIM35A0A1B0GVV1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SMIM35A0A1B0GVV1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
SMIM35A0A1B0GVV1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMIM35A0A1B0GVV1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.98■■□□□ 1.91
SMIM35A0A1B0GVV1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms