Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC194A0A1B0GVG4 AL359504.2-201ENST00000605506 1601 ntBASIC28.12■■■□□ 2.09
CCDC194A0A1B0GVG4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CCDC194A0A1B0GVG4 AL157400.5-201ENST00000507624 621 ntBASIC28.12■■■□□ 2.09
CCDC194A0A1B0GVG4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC194A0A1B0GVG4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC194A0A1B0GVG4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 AC092296.2-201ENST00000589470 999 ntBASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC194A0A1B0GVG4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.09■■■□□ 2.09
CCDC194A0A1B0GVG4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC194A0A1B0GVG4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CCDC194A0A1B0GVG4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CCDC194A0A1B0GVG4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.07■■■□□ 2.08
CCDC194A0A1B0GVG4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCDC194A0A1B0GVG4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.06■■■□□ 2.08
CCDC194A0A1B0GVG4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
CCDC194A0A1B0GVG4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC194A0A1B0GVG4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCDC194A0A1B0GVG4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
CCDC194A0A1B0GVG4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.04■■■□□ 2.08
CCDC194A0A1B0GVG4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC194A0A1B0GVG4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC194A0A1B0GVG4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.03■■■□□ 2.08
CCDC194A0A1B0GVG4 ECEL1P2-201ENST00000461596 1295 ntBASIC28.03■■■□□ 2.08
CCDC194A0A1B0GVG4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCDC194A0A1B0GVG4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCDC194A0A1B0GVG4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCDC194A0A1B0GVG4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28■■■□□ 2.07
CCDC194A0A1B0GVG4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CCDC194A0A1B0GVG4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.99■■■□□ 2.07
CCDC194A0A1B0GVG4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.99■■■□□ 2.07
CCDC194A0A1B0GVG4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CCDC194A0A1B0GVG4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC194A0A1B0GVG4 HSD17B1P1-201ENST00000590052 955 ntBASIC27.98■■■□□ 2.07
CCDC194A0A1B0GVG4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC194A0A1B0GVG4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC194A0A1B0GVG4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CCDC194A0A1B0GVG4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 SMPD5-203ENST00000639008 1464 ntBASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 AC025884.2-201ENST00000553429 711 ntBASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CCDC194A0A1B0GVG4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CCDC194A0A1B0GVG4 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.96■■■□□ 2.07
CCDC194A0A1B0GVG4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
CCDC194A0A1B0GVG4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
CCDC194A0A1B0GVG4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
CCDC194A0A1B0GVG4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CCDC194A0A1B0GVG4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.95■■■□□ 2.06
CCDC194A0A1B0GVG4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.95■■■□□ 2.06
CCDC194A0A1B0GVG4 RNF126P1-201ENST00000567452 1320 ntBASIC27.94■■■□□ 2.06
CCDC194A0A1B0GVG4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
CCDC194A0A1B0GVG4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms