Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 KRT18P60-201ENST00000312876 1297 ntBASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 TSPY13P-201ENST00000338964 914 ntBASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 AC007029.1-201ENST00000604183 313 ntBASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 AL359258.2-201ENST00000564063 1566 ntBASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV20A0A0B4J274 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV20A0A0B4J274 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV20A0A0B4J274 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRAV20A0A0B4J274 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRAV20A0A0B4J274 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAV20A0A0B4J274 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
TRAV20A0A0B4J274 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV20A0A0B4J274 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV20A0A0B4J274 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV20A0A0B4J274 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV20A0A0B4J274 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV20A0A0B4J274 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV20A0A0B4J274 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRAV20A0A0B4J274 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 AL139393.2-201ENST00000608721 2025 ntBASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 SMPD5-203ENST00000639008 1464 ntBASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 ATP5G2P3-201ENST00000429083 425 ntBASIC20.58■□□□□ 0.89
TRAV20A0A0B4J274 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAV20A0A0B4J274 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV20A0A0B4J274 AC004987.1-201ENST00000428627 508 ntBASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV20A0A0B4J274 AP002414.2-202ENST00000590929 1450 ntBASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV20A0A0B4J274 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV20A0A0B4J274 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV20A0A0B4J274 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRAV20A0A0B4J274 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV20A0A0B4J274 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 AC133552.2-201ENST00000619106 1032 ntBASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV20A0A0B4J274 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV20A0A0B4J274 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV20A0A0B4J274 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 AC009831.1-201ENST00000580420 1582 ntBASIC20.51■□□□□ 0.87
TRAV20A0A0B4J274 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 AC025884.2-201ENST00000553429 711 ntBASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV20A0A0B4J274 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRAV20A0A0B4J274 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms