Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 KRT18P48-201ENST00000434763 852 ntBASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 DUX4L26-201ENST00000489078 1255 ntBASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HLA-DRB4X5D2U9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 AC012317.2-201ENST00000623305 2251 ntBASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 AC112907.2-201ENST00000448639 330 ntBASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 KRT18P38-201ENST00000449496 1282 ntBASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HLA-DRB4X5D2U9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HLA-DRB4X5D2U9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms