Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 FAAHP1-202ENST00000446499 1238 ntBASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 AC079781.3-201ENST00000449110 356 ntBASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 AC124864.1-201ENST00000623408 392 ntBASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HRH3Q9Y5N1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 AL354751.1-201ENST00000412768 1863 ntBASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HRH3Q9Y5N1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 IGHV3-47-201ENST00000425060 335 ntBASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 AL121772.3-201ENST00000610840 674 ntBASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HRH3Q9Y5N1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 AC135050.7-201ENST00000624508 2218 ntBASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.44■□□□□ 0.22
HRH3Q9Y5N1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms