Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AL022342.1-201ENST00000400363 863 ntBASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 RBM17P3-201ENST00000417687 1192 ntBASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 RNA5SP419-201ENST00000515908 135 ntBASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHB2Q9Y5E7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AC093010.1-201ENST00000473625 1624 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 KRT18P67-201ENST00000432816 1264 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 FGFR3P6-201ENST00000457012 610 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AF186996.4-201ENST00000467186 377 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AL773604.1-201ENST00000617417 272 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AC148477.8-201ENST00000624298 468 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 AC018470.1-201ENST00000624790 3129 ntBASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB2Q9Y5E7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 FLJ13224-201ENST00000313737 1514 ntBASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 AP001005.1-201ENST00000571755 1248 ntBASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB2Q9Y5E7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.7
PCDHB2Q9Y5E7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms