Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.7■□□□□ 0.1
COMMD3Q9UBI1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 MIR6821-201ENST00000617625 74 ntBASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COMMD3Q9UBI1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 AC100803.2-201ENST00000562459 1963 ntBASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 LINC00304-203ENST00000565008 1864 ntBASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
COMMD3Q9UBI1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms