Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AC005332.3-201ENST00000589904 676 ntBASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NECTIN3Q9NQS3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 UPK3BP1-201ENST00000428678 509 ntBASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 KRT89P-201ENST00000620027 1478 ntBASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 Z83836.1-201ENST00000624605 1642 ntBASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.09■□□□□ 0.33
NECTIN3Q9NQS3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 AC084018.2-201ENST00000613093 2607 ntBASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NECTIN3Q9NQS3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 IGHGP-201ENST00000390555 1178 ntBASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NECTIN3Q9NQS3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms