Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 AL359075.1-203ENST00000462729 1002 ntBASIC18.86■□□□□ 0.61
TRIM11Q96F44 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM11Q96F44 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM11Q96F44 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 AC211429.1-201ENST00000415277 523 ntBASIC18.85■□□□□ 0.61
TRIM11Q96F44 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM11Q96F44 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 AL023806.1-201ENST00000603994 1649 ntBASIC18.85■□□□□ 0.61
TRIM11Q96F44 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM11Q96F44 BX276092.7-203ENST00000637198 1536 ntBASIC18.84■□□□□ 0.61
TRIM11Q96F44 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 AC112907.2-201ENST00000448639 330 ntBASIC18.84■□□□□ 0.61
TRIM11Q96F44 KRT18P38-201ENST00000449496 1282 ntBASIC18.84■□□□□ 0.61
TRIM11Q96F44 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 AC006011.2-201ENST00000621313 1158 ntBASIC18.84■□□□□ 0.61
TRIM11Q96F44 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM11Q96F44 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM11Q96F44 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TRIM11Q96F44 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.83■□□□□ 0.61
TRIM11Q96F44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM11Q96F44 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM11Q96F44 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM11Q96F44 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms