Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 PCDHA1-201ENST00000378133 2726 ntBASIC15.72■□□□□ 0.11
AP3S1Q92572 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
AP3S1Q92572 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
AP3S1Q92572 AC008687.6-201ENST00000596318 630 ntBASIC15.72■□□□□ 0.11
AP3S1Q92572 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
AP3S1Q92572 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.72■□□□□ 0.11
AP3S1Q92572 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
AP3S1Q92572 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AP3S1Q92572 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AP3S1Q92572 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP3S1Q92572 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3S1Q92572 AC091874.3-201ENST00000512672 1195 ntBASIC15.71■□□□□ 0.11
AP3S1Q92572 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.71■□□□□ 0.11
AP3S1Q92572 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 AC060766.5-201ENST00000590539 871 ntBASIC15.71■□□□□ 0.11
AP3S1Q92572 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 LINC01451-201ENST00000623792 534 ntBASIC15.71■□□□□ 0.11
AP3S1Q92572 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.71■□□□□ 0.11
AP3S1Q92572 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3S1Q92572 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3S1Q92572 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.71■□□□□ 0.1
AP3S1Q92572 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.71■□□□□ 0.1
AP3S1Q92572 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3S1Q92572 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
AP3S1Q92572 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
AP3S1Q92572 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
AP3S1Q92572 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3S1Q92572 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3S1Q92572 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3S1Q92572 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3S1Q92572 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP3S1Q92572 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3S1Q92572 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S1Q92572 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S1Q92572 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S1Q92572 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S1Q92572 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3S1Q92572 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3S1Q92572 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S1Q92572 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3S1Q92572 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms