Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 HLA-F-220ENST00000434407 884 ntBASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 KRT18P57-201ENST00000443599 1254 ntBASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 AC024563.2-201ENST00000603282 481 ntBASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 AC134043.2-201ENST00000624206 2238 ntBASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF439Q8NDP4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AC006116.8-202ENST00000587620 1550 ntBASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AC006011.2-201ENST00000621313 1158 ntBASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF439Q8NDP4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF439Q8NDP4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms