Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 MIR3180-1-201ENST00000580374 94 ntBASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 MIR3180-3-201ENST00000584616 94 ntBASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC00304Q8N9R0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC00304Q8N9R0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC135776.1-201ENST00000319817 2481 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC093677.2-201ENST00000600169 1863 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC068472.1-201ENST00000474589 881 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC112698.1-201ENST00000510299 916 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 CLEC4GP1-201ENST00000596555 870 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC099336.1-202ENST00000602961 463 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC116407.2-201ENST00000613639 860 ntBASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00304Q8N9R0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 POR-209ENST00000439269 1858 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00304Q8N9R0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms