Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CRLF3Q8IUI8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 GPAT2P1-201ENST00000444924 1672 ntBASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CRLF3Q8IUI8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 RN7SL850P-201ENST00000579959 291 ntBASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CRLF3Q8IUI8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 AC005521.1-201ENST00000393351 872 ntBASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 AC113347.1-201ENST00000413321 391 ntBASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 TMPOP1-202ENST00000424642 1267 ntBASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.82■□□□□ 0.44
CRLF3Q8IUI8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 AC096733.2-201ENST00000609937 1394 ntBASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 SLC25A3P1-201ENST00000443844 931 ntBASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 EGLN1P1-201ENST00000531623 762 ntBASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 AC010331.1-201ENST00000611423 582 ntBASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.81■□□□□ 0.44
CRLF3Q8IUI8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms