Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 AP005901.3-202ENST00000581653 237 ntBASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 AC092329.2-201ENST00000598402 547 ntBASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.91■□□□□ 0.46
LYSMD3Q7Z3D4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC067852.2-201ENST00000590513 2313 ntBASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC005336.2-201ENST00000593183 939 ntBASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYSMD3Q7Z3D4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
LYSMD3Q7Z3D4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
LYSMD3Q7Z3D4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 VENTXP7-201ENST00000475503 772 ntBASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LYSMD3Q7Z3D4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms