Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 AC079140.4-201ENST00000507448 529 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L2-201ENST00000561772 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 MIR4449-201ENST00000578365 66 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L6-201ENST00000626483 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L1-201ENST00000627662 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L8-201ENST00000629013 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L3-201ENST00000630187 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L7-201ENST00000630678 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DUX4L5-201ENST00000630834 1275 ntBASIC13.43□□□□□ -0.26
HIST1H2BDP58876 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HIST1H2BDP58876 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 KRT8P32-201ENST00000512863 1461 ntBASIC13.42□□□□□ -0.26
HIST1H2BDP58876 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HIST1H2BDP58876 AC063926.3-201ENST00000624734 5658 ntBASIC13.42□□□□□ -0.26
HIST1H2BDP58876 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 GPAT2P1-201ENST00000444924 1672 ntBASIC13.41□□□□□ -0.26
HIST1H2BDP58876 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 AC126544.1-201ENST00000580842 1059 ntBASIC13.41□□□□□ -0.26
HIST1H2BDP58876 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.41□□□□□ -0.26
HIST1H2BDP58876 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
HIST1H2BDP58876 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms