Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF140P52738 TOB2P1-201ENST00000469761 992 ntBASIC17.72■□□□□ 0.43
ZNF140P52738 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF140P52738 VENTXP7-201ENST00000475503 772 ntBASIC17.72■□□□□ 0.43
ZNF140P52738 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF140P52738 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF140P52738 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF140P52738 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.72■□□□□ 0.43
ZNF140P52738 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF140P52738 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF140P52738 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF140P52738 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF140P52738 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF140P52738 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF140P52738 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF140P52738 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF140P52738 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 COX5BP2-201ENST00000392354 334 ntBASIC17.71■□□□□ 0.43
ZNF140P52738 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF140P52738 ATP5G2P1-201ENST00000433580 426 ntBASIC17.71■□□□□ 0.43
ZNF140P52738 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.71■□□□□ 0.43
ZNF140P52738 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF140P52738 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ZNF140P52738 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF140P52738 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF140P52738 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF140P52738 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF140P52738 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ZNF140P52738 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF140P52738 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF140P52738 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF140P52738 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF140P52738 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF140P52738 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF140P52738 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.71■□□□□ 0.42
ZNF140P52738 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ZNF140P52738 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ZNF140P52738 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ZNF140P52738 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF140P52738 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF140P52738 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF140P52738 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZNF140P52738 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF140P52738 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF140P52738 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF140P52738 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF140P52738 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF140P52738 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF140P52738 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.69■□□□□ 0.42
ZNF140P52738 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF140P52738 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms