Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
BRCC3P46736 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
BRCC3P46736 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 MIR574-201ENST00000385209 96 ntBASIC18.91■□□□□ 0.62
BRCC3P46736 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.91■□□□□ 0.62
BRCC3P46736 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 AC103564.2-201ENST00000432853 1299 ntBASIC18.91■□□□□ 0.62
BRCC3P46736 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.91■□□□□ 0.62
BRCC3P46736 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.91■□□□□ 0.62
BRCC3P46736 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.91■□□□□ 0.62
BRCC3P46736 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.91■□□□□ 0.62
BRCC3P46736 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.91■□□□□ 0.62
BRCC3P46736 AC073592.5-201ENST00000624854 528 ntBASIC18.91■□□□□ 0.62
BRCC3P46736 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BRCC3P46736 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.91■□□□□ 0.62
BRCC3P46736 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 RPS2P28-201ENST00000314255 741 ntBASIC18.9■□□□□ 0.62
BRCC3P46736 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 RPL13AP23-201ENST00000480739 586 ntBASIC18.9■□□□□ 0.62
BRCC3P46736 AC092910.1-201ENST00000482027 1129 ntBASIC18.9■□□□□ 0.62
BRCC3P46736 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.9■□□□□ 0.62
BRCC3P46736 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.9■□□□□ 0.62
BRCC3P46736 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
BRCC3P46736 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BRCC3P46736 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
BRCC3P46736 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.9■□□□□ 0.62
BRCC3P46736 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRCC3P46736 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
BRCC3P46736 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BRCC3P46736 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
BRCC3P46736 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
BRCC3P46736 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCC3P46736 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.89■□□□□ 0.61
BRCC3P46736 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.89■□□□□ 0.61
BRCC3P46736 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BRCC3P46736 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCC3P46736 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.89■□□□□ 0.61
BRCC3P46736 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCC3P46736 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BRCC3P46736 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCC3P46736 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCC3P46736 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCC3P46736 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCC3P46736 AL049757.1-201ENST00000616842 1596 ntBASIC18.89■□□□□ 0.61
BRCC3P46736 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.89■□□□□ 0.61
BRCC3P46736 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BRCC3P46736 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.88■□□□□ 0.61
BRCC3P46736 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BRCC3P46736 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCC3P46736 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.88■□□□□ 0.61
BRCC3P46736 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCC3P46736 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.88■□□□□ 0.61
BRCC3P46736 AC106730.1-201ENST00000566722 1090 ntBASIC18.88■□□□□ 0.61
BRCC3P46736 AC107918.4-202ENST00000641623 219 ntBASIC18.88■□□□□ 0.61
BRCC3P46736 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 HLA-J-201ENST00000462773 1622 ntBASIC18.88■□□□□ 0.61
BRCC3P46736 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
BRCC3P46736 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms