Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 MIR770-201ENST00000390219 98 ntBASIC19.21■□□□□ 0.67
RFC2P35250 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
RFC2P35250 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC2P35250 AP000344.2-201ENST00000512987 629 ntBASIC19.21■□□□□ 0.67
RFC2P35250 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.21■□□□□ 0.67
RFC2P35250 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.21■□□□□ 0.67
RFC2P35250 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFC2P35250 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFC2P35250 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC2P35250 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC2P35250 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
RFC2P35250 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.2■□□□□ 0.66
RFC2P35250 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 AC004877.2-201ENST00000623941 599 ntBASIC19.2■□□□□ 0.66
RFC2P35250 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RFC2P35250 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC2P35250 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFC2P35250 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC2P35250 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RFC2P35250 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RFC2P35250 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RFC2P35250 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC2P35250 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 AP002414.1-201ENST00000391405 1147 ntBASIC19.19■□□□□ 0.66
RFC2P35250 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
RFC2P35250 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.19■□□□□ 0.66
RFC2P35250 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.19■□□□□ 0.66
RFC2P35250 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
RFC2P35250 AL031432.2-201ENST00000566714 459 ntBASIC19.19■□□□□ 0.66
RFC2P35250 AL928711.1-201ENST00000570165 459 ntBASIC19.19■□□□□ 0.66
RFC2P35250 AC010507.1-201ENST00000633895 436 ntBASIC19.19■□□□□ 0.66
RFC2P35250 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.19■□□□□ 0.66
RFC2P35250 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC2P35250 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RFC2P35250 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.19■□□□□ 0.66
RFC2P35250 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC2P35250 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RFC2P35250 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFC2P35250 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms