Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRIM3O75382 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM3O75382 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM3O75382 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TRIM3O75382 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.26
TRIM3O75382 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM3O75382 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM3O75382 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM3O75382 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM3O75382 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM3O75382 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM3O75382 AC008687.5-201ENST00000593746 558 ntBASIC16.64■□□□□ 0.25
TRIM3O75382 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM3O75382 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 FER1L4-210ENST00000615531 5998 ntBASIC16.64■□□□□ 0.25
TRIM3O75382 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM3O75382 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM3O75382 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM3O75382 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRIM3O75382 AC099343.3-201ENST00000605834 2503 ntBASIC16.63■□□□□ 0.25
TRIM3O75382 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 CHCHD2P8-201ENST00000429873 447 ntBASIC16.63■□□□□ 0.25
TRIM3O75382 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM3O75382 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM3O75382 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM3O75382 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM3O75382 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM3O75382 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM3O75382 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM3O75382 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM3O75382 AC008764.6-201ENST00000595909 2069 ntBASIC16.62■□□□□ 0.25
TRIM3O75382 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM3O75382 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms