Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.19■□□□□ 0.34
SPHK1Q9NYA1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 KRT16P4-201ENST00000453883 522 ntBASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC011467.2-201ENST00000598425 242 ntBASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 AC097374.2-201ENST00000618617 1306 ntBASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPHK1Q9NYA1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 AL121894.2-201ENST00000602977 491 ntBASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK1Q9NYA1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 AC138932.1-201ENST00000534164 6830 ntBASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 INTS4P1-201ENST00000438455 1935 ntBASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 AL591684.3-201ENST00000605187 298 ntBASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.16■□□□□ 0.34
SPHK1Q9NYA1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms