Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.4■□□□□ 0.54
RPRD1AQ96P16 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPRD1AQ96P16 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPRD1AQ96P16 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RPRD1AQ96P16 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.39■□□□□ 0.54
RPRD1AQ96P16 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.39■□□□□ 0.54
RPRD1AQ96P16 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.39■□□□□ 0.54
RPRD1AQ96P16 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.39■□□□□ 0.54
RPRD1AQ96P16 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPRD1AQ96P16 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 AC009533.2-201ENST00000543664 586 ntBASIC18.39■□□□□ 0.53
RPRD1AQ96P16 KRT126P-201ENST00000549467 1181 ntBASIC18.39■□□□□ 0.53
RPRD1AQ96P16 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPRD1AQ96P16 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 POM121L3P-201ENST00000419331 1163 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AL450487.1-201ENST00000426799 995 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AC091304.2-201ENST00000564639 760 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AL732292.2-201ENST00000609649 430 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AC116407.2-201ENST00000613639 860 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 TP73-AS1-210ENST00000637775 1455 ntBASIC18.38■□□□□ 0.53
RPRD1AQ96P16 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.38■□□□□ 0.53
RPRD1AQ96P16 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 TSPY19P-201ENST00000418461 509 ntBASIC18.37■□□□□ 0.53
RPRD1AQ96P16 TSPY18P-201ENST00000441642 509 ntBASIC18.37■□□□□ 0.53
RPRD1AQ96P16 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 KRT18P31-201ENST00000506277 1292 ntBASIC18.37■□□□□ 0.53
RPRD1AQ96P16 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 AC114341.1-201ENST00000618070 349 ntBASIC18.37■□□□□ 0.53
RPRD1AQ96P16 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 KRT18P55-202ENST00000578578 1546 ntBASIC18.37■□□□□ 0.53
RPRD1AQ96P16 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPRD1AQ96P16 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms