Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 DUTP2-201ENST00000519164 463 ntBASIC15.55■□□□□ 0.08
CPNE2Q96FN4 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 AC010240.3-201ENST00000607688 395 ntBASIC15.55■□□□□ 0.08
CPNE2Q96FN4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE2Q96FN4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 SIRPAP1-201ENST00000448467 1770 ntBASIC15.54■□□□□ 0.08
CPNE2Q96FN4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 AC116407.2-201ENST00000613639 860 ntBASIC15.54■□□□□ 0.08
CPNE2Q96FN4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 AP006294.2-201ENST00000641667 209 ntBASIC15.54■□□□□ 0.08
CPNE2Q96FN4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE2Q96FN4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AL024508.2-201ENST00000607749 1894 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC007663.1-201ENST00000438948 1240 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 EGLN1P1-201ENST00000531623 762 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC092865.7-201ENST00000641832 219 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC006116.8-202ENST00000587620 1550 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.53■□□□□ 0.08
CPNE2Q96FN4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE2Q96FN4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPNE2Q96FN4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms