Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 AC243591.1-201ENST00000452967 1364 ntBASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0A1Q93050 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 AL049840.3-201ENST00000602669 611 ntBASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 AC116407.2-201ENST00000613639 860 ntBASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP6V0A1Q93050 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 FLJ13224-201ENST00000313737 1514 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 FAM220CP-201ENST00000395253 831 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 AP005117.1-201ENST00000584346 1413 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 ABALON-201ENST00000629058 1903 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 BICD1-207ENST00000551848 1962 ntBASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0A1Q93050 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 AC007967.3-201ENST00000434308 558 ntBASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6V0A1Q93050 AC139887.3-201ENST00000568585 713 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms