Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 INTS4P1-201ENST00000438455 1935 ntBASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC008764.6-201ENST00000595909 2069 ntBASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC122714.2-201ENST00000502787 707 ntBASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 KRT18P31-201ENST00000506277 1292 ntBASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 MIR5100-201ENST00000579544 119 ntBASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAM1L1Q8N609 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 AC091304.2-201ENST00000564639 760 ntBASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAM1L1Q8N609 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRAM1L1Q8N609 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms