Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEP78395 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEP78395 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.03■□□□□ 0.48
PRAMEP78395 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
PRAMEP78395 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PRAMEP78395 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.03■□□□□ 0.48
PRAMEP78395 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.03■□□□□ 0.48
PRAMEP78395 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRAMEP78395 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PRAMEP78395 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PRAMEP78395 AC112907.2-201ENST00000448639 330 ntBASIC18.02■□□□□ 0.48
PRAMEP78395 KRT18P38-201ENST00000449496 1282 ntBASIC18.02■□□□□ 0.48
PRAMEP78395 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
PRAMEP78395 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.02■□□□□ 0.48
PRAMEP78395 ZNF444P1-201ENST00000559497 298 ntBASIC18.02■□□□□ 0.48
PRAMEP78395 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.02■□□□□ 0.48
PRAMEP78395 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEP78395 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.02■□□□□ 0.48
PRAMEP78395 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PRAMEP78395 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRAMEP78395 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
PRAMEP78395 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PRAMEP78395 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.47
PRAMEP78395 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.02■□□□□ 0.47
PRAMEP78395 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PRAMEP78395 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRAMEP78395 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEP78395 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEP78395 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEP78395 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEP78395 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 RN7SL850P-201ENST00000579959 291 ntBASIC18.01■□□□□ 0.47
PRAMEP78395 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.01■□□□□ 0.47
PRAMEP78395 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.01■□□□□ 0.47
PRAMEP78395 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRAMEP78395 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PRAMEP78395 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms