Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.26■□□□□ 0.51
ATXN3P54252 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.26■□□□□ 0.51
ATXN3P54252 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATXN3P54252 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.25■□□□□ 0.51
ATXN3P54252 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.25■□□□□ 0.51
ATXN3P54252 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 MINOS1P3-201ENST00000457048 203 ntBASIC18.25■□□□□ 0.51
ATXN3P54252 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.25■□□□□ 0.51
ATXN3P54252 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.25■□□□□ 0.51
ATXN3P54252 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 AF228730.7-201ENST00000641842 219 ntBASIC18.25■□□□□ 0.51
ATXN3P54252 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.25■□□□□ 0.51
ATXN3P54252 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATXN3P54252 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 HOXB1-202ENST00000577092 1414 ntBASIC18.24■□□□□ 0.51
ATXN3P54252 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATXN3P54252 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
ATXN3P54252 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATXN3P54252 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 AL592071.1-201ENST00000611956 408 ntBASIC18.24■□□□□ 0.51
ATXN3P54252 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.24■□□□□ 0.51
ATXN3P54252 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.24■□□□□ 0.51
ATXN3P54252 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.24■□□□□ 0.51
ATXN3P54252 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
ATXN3P54252 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATXN3P54252 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 AC008556.1-201ENST00000610908 2040 ntBASIC18.23■□□□□ 0.51
ATXN3P54252 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATXN3P54252 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.23■□□□□ 0.51
ATXN3P54252 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATXN3P54252 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
ATXN3P54252 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.23■□□□□ 0.51
ATXN3P54252 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.23■□□□□ 0.51
ATXN3P54252 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATXN3P54252 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ATXN3P54252 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.23■□□□□ 0.51
ATXN3P54252 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.23■□□□□ 0.51
ATXN3P54252 AC093909.1-201ENST00000504731 1122 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms