Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGCLP35914 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
HMGCLP35914 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGCLP35914 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
HMGCLP35914 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.77■□□□□ 0.44
HMGCLP35914 AC012615.1-201ENST00000565797 1299 ntBASIC17.77■□□□□ 0.44
HMGCLP35914 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
HMGCLP35914 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HMGCLP35914 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGCLP35914 AC067852.2-201ENST00000590513 2313 ntBASIC17.77■□□□□ 0.43
HMGCLP35914 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HMGCLP35914 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.77■□□□□ 0.43
HMGCLP35914 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLP35914 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLP35914 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.77■□□□□ 0.43
HMGCLP35914 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCLP35914 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 AC010460.3-201ENST00000511359 1579 ntBASIC17.76■□□□□ 0.43
HMGCLP35914 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCLP35914 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.76■□□□□ 0.43
HMGCLP35914 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HMGCLP35914 AC009533.2-201ENST00000543664 586 ntBASIC17.76■□□□□ 0.43
HMGCLP35914 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.76■□□□□ 0.43
HMGCLP35914 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HMGCLP35914 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCLP35914 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HMGCLP35914 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 BX276092.7-203ENST00000637198 1536 ntBASIC17.76■□□□□ 0.43
HMGCLP35914 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCLP35914 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HMGCLP35914 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 AC007967.3-201ENST00000434308 558 ntBASIC17.75■□□□□ 0.43
HMGCLP35914 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.75■□□□□ 0.43
HMGCLP35914 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.75■□□□□ 0.43
HMGCLP35914 AP000867.3-201ENST00000524675 377 ntBASIC17.75■□□□□ 0.43
HMGCLP35914 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLP35914 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.75■□□□□ 0.43
HMGCLP35914 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLP35914 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCLP35914 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCLP35914 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCLP35914 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HMGCLP35914 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCLP35914 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCLP35914 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCLP35914 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCLP35914 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCLP35914 NSUN5P1-202ENST00000421140 1535 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 NSUN5P2-203ENST00000457352 1529 ntBASIC17.74■□□□□ 0.43
HMGCLP35914 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.74■□□□□ 0.43
HMGCLP35914 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCLP35914 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms