Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYN1P17600 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.32■□□□□ 0.68
SYN1P17600 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SYN1P17600 AL499627.1-201ENST00000569373 2188 ntBASIC19.32■□□□□ 0.68
SYN1P17600 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN1P17600 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYN1P17600 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYN1P17600 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SYN1P17600 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 AC132938.5-201ENST00000624980 1813 ntBASIC19.31■□□□□ 0.68
SYN1P17600 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 MIR943-201ENST00000401286 94 ntBASIC19.31■□□□□ 0.68
SYN1P17600 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 AL627223.1-201ENST00000416693 442 ntBASIC19.31■□□□□ 0.68
SYN1P17600 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
SYN1P17600 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.31■□□□□ 0.68
SYN1P17600 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
SYN1P17600 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.31■□□□□ 0.68
SYN1P17600 AC009093.7-201ENST00000623853 1223 ntBASIC19.31■□□□□ 0.68
SYN1P17600 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SYN1P17600 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SYN1P17600 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 AC006116.8-202ENST00000587620 1550 ntBASIC19.31■□□□□ 0.68
SYN1P17600 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYN1P17600 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.31■□□□□ 0.68
SYN1P17600 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.31■□□□□ 0.68
SYN1P17600 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SYN1P17600 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.3■□□□□ 0.68
SYN1P17600 LINC02560-201ENST00000596379 459 ntBASIC19.3■□□□□ 0.68
SYN1P17600 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.3■□□□□ 0.68
SYN1P17600 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.3■□□□□ 0.68
SYN1P17600 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.3■□□□□ 0.68
SYN1P17600 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN1P17600 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN1P17600 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SYN1P17600 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.3■□□□□ 0.68
SYN1P17600 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SYN1P17600 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 AC005082.1-201ENST00000413042 2259 ntBASIC19.29■□□□□ 0.68
SYN1P17600 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.29■□□□□ 0.68
SYN1P17600 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.29■□□□□ 0.68
SYN1P17600 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.29■□□□□ 0.68
SYN1P17600 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.29■□□□□ 0.68
SYN1P17600 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SYN1P17600 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.29■□□□□ 0.68
SYN1P17600 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.29■□□□□ 0.68
SYN1P17600 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
SYN1P17600 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.28■□□□□ 0.68
SYN1P17600 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.28■□□□□ 0.68
SYN1P17600 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.28■□□□□ 0.68
SYN1P17600 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
SYN1P17600 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SYN1P17600 AC022494.1-201ENST00000466044 728 ntBASIC19.28■□□□□ 0.68
SYN1P17600 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.28■□□□□ 0.68
SYN1P17600 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms