Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.56■□□□□ 0.24
PRKCAP17252 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 PHGDH-209ENST00000641074 1780 ntBASIC16.56■□□□□ 0.24
PRKCAP17252 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRKCAP17252 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRKCAP17252 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRKCAP17252 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRKCAP17252 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.55■□□□□ 0.24
PRKCAP17252 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 HBZP1-201ENST00000354915 429 ntBASIC16.55■□□□□ 0.24
PRKCAP17252 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.55■□□□□ 0.24
PRKCAP17252 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.55■□□□□ 0.24
PRKCAP17252 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.55■□□□□ 0.24
PRKCAP17252 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRKCAP17252 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRKCAP17252 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRKCAP17252 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.54■□□□□ 0.24
PRKCAP17252 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
PRKCAP17252 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.54■□□□□ 0.24
PRKCAP17252 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.54■□□□□ 0.24
PRKCAP17252 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.54■□□□□ 0.24
PRKCAP17252 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.54■□□□□ 0.24
PRKCAP17252 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.54■□□□□ 0.24
PRKCAP17252 AC008687.5-201ENST00000593746 558 ntBASIC16.54■□□□□ 0.24
PRKCAP17252 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.54■□□□□ 0.24
PRKCAP17252 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.54■□□□□ 0.24
PRKCAP17252 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.54■□□□□ 0.24
PRKCAP17252 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRKCAP17252 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRKCAP17252 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRKCAP17252 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.53■□□□□ 0.24
PRKCAP17252 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.53■□□□□ 0.24
PRKCAP17252 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRKCAP17252 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms