Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C4orf47A7E2U8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 PMPCAP1-201ENST00000508114 1576 ntBASIC17.4■□□□□ 0.38
C4orf47A7E2U8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 AC007967.3-201ENST00000434308 558 ntBASIC17.4■□□□□ 0.38
C4orf47A7E2U8 VN2R19P-201ENST00000442399 1052 ntBASIC17.4■□□□□ 0.38
C4orf47A7E2U8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 AC027612.4-201ENST00000605371 583 ntBASIC17.4■□□□□ 0.38
C4orf47A7E2U8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
C4orf47A7E2U8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C4orf47A7E2U8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 PRYP5-201ENST00000451909 266 ntBASIC17.39■□□□□ 0.37
C4orf47A7E2U8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 AL096865.1-201ENST00000606796 927 ntBASIC17.39■□□□□ 0.37
C4orf47A7E2U8 AC073592.4-201ENST00000623827 446 ntBASIC17.39■□□□□ 0.37
C4orf47A7E2U8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 AC093503.3-201ENST00000624917 2352 ntBASIC17.39■□□□□ 0.37
C4orf47A7E2U8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C4orf47A7E2U8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 MYLKP1-201ENST00000509077 1580 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 TSEN15P1-201ENST00000423257 515 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 AC092474.2-201ENST00000424288 719 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 BCRP1-201ENST00000444246 691 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 PAWRP1-201ENST00000451083 565 ntBASIC17.38■□□□□ 0.37
C4orf47A7E2U8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.38■□□□□ 0.37
C4orf47A7E2U8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms